AMPLICATION OF 0.7KB FRAGMENT KATG GENE FROM CLINICAL MULTI DRUG RESISTANT TUBERCULOSIS ISOLATE IN BALI

During last decade has seen a particular increase in the occurrence of drug-resistant of tuberculosis (DR-TB) and multi-DR strains, such as Isoniazid (INH) resistant strains of <em>M. tuberculosis</em>.  INH resistance is more frequently associated with mutations in the <em>katG<...

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Main Authors: A. W. Dwiputri, K. Ratnayani, S. C. Yowani
Format: Article
Language:English
Published: Universitas Udayana 2014-06-01
Series:Indonesia Journal of Biomedical Science
Subjects:
Online Access:https://ijbs-udayana.org/index.php/ijbs/article/view/118
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spelling doaj-ff12f17a73424c88b755d08b730e898f2020-11-25T03:30:19ZengUniversitas UdayanaIndonesia Journal of Biomedical Science2302-29062014-06-0172636610.15562/ijbs.v7i2.118111AMPLICATION OF 0.7KB FRAGMENT KATG GENE FROM CLINICAL MULTI DRUG RESISTANT TUBERCULOSIS ISOLATE IN BALIA. W. Dwiputri0K. Ratnayani1S. C. Yowani2Department of Pharmacy, Faculty of Mathematics and Natural Sciences, Udayana University, Bali-IndonesiaDepartment of Chemistry, Faculty of Mathematics and Natural Sciences, Udayana University, Bali-IndonesiaDepartment of Pharmacy, Faculty of Mathematics and Natural Sciences, Udayana University, Bali-IndonesiaDuring last decade has seen a particular increase in the occurrence of drug-resistant of tuberculosis (DR-TB) and multi-DR strains, such as Isoniazid (INH) resistant strains of <em>M. tuberculosis</em>.  INH resistance is more frequently associated with mutations in the <em>katG</em> gene. Detection of <em>katG</em> gene mutations can be performed by PCR technique, followed by sequences. The aim of this study is to amplify <em>kat</em>G gene region (0,7 Kb) from clinical isolate of MDR-TB in Bali. DNA isolation for PCR was done by Boom method and <em>katG </em>gene amplification was performed under the following conditions: predenaturation at 95<sup>0</sup>C for 15 min; fourty cycles of denaturation at 94<sup>0</sup>C for 1 min, annealing at 56<sup>0</sup>C for 1 min, extension at 72<sup>0</sup>C for 2 min; final extension at 72<sup>0</sup>C for 10 min. The amplicons were detected by 1.5% agarose gel electrophoresis and showed a specific band size at 0.7 kb. This suggests that the fragment of <em>katG</em> gene has been successfully amplified in these areas.https://ijbs-udayana.org/index.php/ijbs/article/view/118amplification, katg gene, mdr-tb, 0.7 kb
collection DOAJ
language English
format Article
sources DOAJ
author A. W. Dwiputri
K. Ratnayani
S. C. Yowani
spellingShingle A. W. Dwiputri
K. Ratnayani
S. C. Yowani
AMPLICATION OF 0.7KB FRAGMENT KATG GENE FROM CLINICAL MULTI DRUG RESISTANT TUBERCULOSIS ISOLATE IN BALI
Indonesia Journal of Biomedical Science
amplification, katg gene, mdr-tb, 0.7 kb
author_facet A. W. Dwiputri
K. Ratnayani
S. C. Yowani
author_sort A. W. Dwiputri
title AMPLICATION OF 0.7KB FRAGMENT KATG GENE FROM CLINICAL MULTI DRUG RESISTANT TUBERCULOSIS ISOLATE IN BALI
title_short AMPLICATION OF 0.7KB FRAGMENT KATG GENE FROM CLINICAL MULTI DRUG RESISTANT TUBERCULOSIS ISOLATE IN BALI
title_full AMPLICATION OF 0.7KB FRAGMENT KATG GENE FROM CLINICAL MULTI DRUG RESISTANT TUBERCULOSIS ISOLATE IN BALI
title_fullStr AMPLICATION OF 0.7KB FRAGMENT KATG GENE FROM CLINICAL MULTI DRUG RESISTANT TUBERCULOSIS ISOLATE IN BALI
title_full_unstemmed AMPLICATION OF 0.7KB FRAGMENT KATG GENE FROM CLINICAL MULTI DRUG RESISTANT TUBERCULOSIS ISOLATE IN BALI
title_sort amplication of 0.7kb fragment katg gene from clinical multi drug resistant tuberculosis isolate in bali
publisher Universitas Udayana
series Indonesia Journal of Biomedical Science
issn 2302-2906
publishDate 2014-06-01
description During last decade has seen a particular increase in the occurrence of drug-resistant of tuberculosis (DR-TB) and multi-DR strains, such as Isoniazid (INH) resistant strains of <em>M. tuberculosis</em>.  INH resistance is more frequently associated with mutations in the <em>katG</em> gene. Detection of <em>katG</em> gene mutations can be performed by PCR technique, followed by sequences. The aim of this study is to amplify <em>kat</em>G gene region (0,7 Kb) from clinical isolate of MDR-TB in Bali. DNA isolation for PCR was done by Boom method and <em>katG </em>gene amplification was performed under the following conditions: predenaturation at 95<sup>0</sup>C for 15 min; fourty cycles of denaturation at 94<sup>0</sup>C for 1 min, annealing at 56<sup>0</sup>C for 1 min, extension at 72<sup>0</sup>C for 2 min; final extension at 72<sup>0</sup>C for 10 min. The amplicons were detected by 1.5% agarose gel electrophoresis and showed a specific band size at 0.7 kb. This suggests that the fragment of <em>katG</em> gene has been successfully amplified in these areas.
topic amplification, katg gene, mdr-tb, 0.7 kb
url https://ijbs-udayana.org/index.php/ijbs/article/view/118
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