Performance of the FilmArray Blood culture identification panel in positive blood culture bottles and cerebrospinal fluid for the diagnosis of sepsis and meningitis
Sepsis and meningitis are life threatening medical conditions. Culture-based methods are used for identification of the causative pathogens, but they can be improved by implementation of additional test systems. We evaluated the performance of the novel FilmArray blood culture identification (BCID;...
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doaj-fef1073018f745d4a2c0c5bfc506cc812020-11-25T03:50:05ZengGerman Medical Science GMS Publishing HouseGMS Infectious Diseases2195-88312016-09-014Doc0610.3205/id000024Performance of the FilmArray Blood culture identification panel in positive blood culture bottles and cerebrospinal fluid for the diagnosis of sepsis and meningitisLeitner, Eva0Hoenigl, Martin1Wagner, Bernadette2Krause, Robert3Feierl, Gebhard4Grisold, Andrea J.5Institute of Hygiene, Microbiology and Environmental Medicine, Medical University of Graz, AustriaSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, AustriaSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, AustriaSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, AustriaInstitute of Hygiene, Microbiology and Environmental Medicine, Medical University of Graz, AustriaInstitute of Hygiene, Microbiology and Environmental Medicine, Medical University of Graz, AustriaSepsis and meningitis are life threatening medical conditions. Culture-based methods are used for identification of the causative pathogens, but they can be improved by implementation of additional test systems. We evaluated the performance of the novel FilmArray blood culture identification (BCID; Biofire Diagnostics) panel for rapid and accurate identification of microorganisms in positive blood cultures and additionally, in this cerebrospinal fluid (CSF) pilot study for direct testing of CSF. A total of 107 positive blood cultures and 20 CSF samples (positive and negative) were investigated and compared to the routine procedures. Of the 107 positive blood cultures, 90.7% (97/107) showed monomicrobial growth and 9.3% (10/107) polymicrobial growth. The FilmArray BCID panel covered 89.3% (25/28) of the bacteria and 100% (2/2) of the yeasts found in this study and accurately identified all of them.From the 20 retrospective analyzed CSF, in 9 positive specimens ifferent bacterial species were identified. Discrepant identification results were found in 25% (5/20) and a low sensitivity of 50% (95% CI of 15.7% to 84.3%) was detected.Our study confirms the FilmArray BCID panel as a rapid, easy to handle PCR system with a good performance in positive blood cultures without Gram-staining result. However, our results additionally suggest that the system is not useful for direct CSF testing due to poor sensitivity.http://www.egms.de/static/en/journals/id/2016-4/id000024.shtmlFilmArrayblood culturecerebrospinal fluidmultiplex PCRsepsismeningitisrapid identification |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Leitner, Eva Hoenigl, Martin Wagner, Bernadette Krause, Robert Feierl, Gebhard Grisold, Andrea J. |
spellingShingle |
Leitner, Eva Hoenigl, Martin Wagner, Bernadette Krause, Robert Feierl, Gebhard Grisold, Andrea J. Performance of the FilmArray Blood culture identification panel in positive blood culture bottles and cerebrospinal fluid for the diagnosis of sepsis and meningitis GMS Infectious Diseases FilmArray blood culture cerebrospinal fluid multiplex PCR sepsis meningitis rapid identification |
author_facet |
Leitner, Eva Hoenigl, Martin Wagner, Bernadette Krause, Robert Feierl, Gebhard Grisold, Andrea J. |
author_sort |
Leitner, Eva |
title |
Performance of the FilmArray Blood culture identification panel in positive blood culture bottles and cerebrospinal fluid for the diagnosis of sepsis and meningitis |
title_short |
Performance of the FilmArray Blood culture identification panel in positive blood culture bottles and cerebrospinal fluid for the diagnosis of sepsis and meningitis |
title_full |
Performance of the FilmArray Blood culture identification panel in positive blood culture bottles and cerebrospinal fluid for the diagnosis of sepsis and meningitis |
title_fullStr |
Performance of the FilmArray Blood culture identification panel in positive blood culture bottles and cerebrospinal fluid for the diagnosis of sepsis and meningitis |
title_full_unstemmed |
Performance of the FilmArray Blood culture identification panel in positive blood culture bottles and cerebrospinal fluid for the diagnosis of sepsis and meningitis |
title_sort |
performance of the filmarray blood culture identification panel in positive blood culture bottles and cerebrospinal fluid for the diagnosis of sepsis and meningitis |
publisher |
German Medical Science GMS Publishing House |
series |
GMS Infectious Diseases |
issn |
2195-8831 |
publishDate |
2016-09-01 |
description |
Sepsis and meningitis are life threatening medical conditions. Culture-based methods are used for identification of the causative pathogens, but they can be improved by implementation of additional test systems. We evaluated the performance of the novel FilmArray blood culture identification (BCID; Biofire Diagnostics) panel for rapid and accurate identification of microorganisms in positive blood cultures and additionally, in this cerebrospinal fluid (CSF) pilot study for direct testing of CSF. A total of 107 positive blood cultures and 20 CSF samples (positive and negative) were investigated and compared to the routine procedures. Of the 107 positive blood cultures, 90.7% (97/107) showed monomicrobial growth and 9.3% (10/107) polymicrobial growth. The FilmArray BCID panel covered 89.3% (25/28) of the bacteria and 100% (2/2) of the yeasts found in this study and accurately identified all of them.From the 20 retrospective analyzed CSF, in 9 positive specimens ifferent bacterial species were identified. Discrepant identification results were found in 25% (5/20) and a low sensitivity of 50% (95% CI of 15.7% to 84.3%) was detected.Our study confirms the FilmArray BCID panel as a rapid, easy to handle PCR system with a good performance in positive blood cultures without Gram-staining result. However, our results additionally suggest that the system is not useful for direct CSF testing due to poor sensitivity. |
topic |
FilmArray blood culture cerebrospinal fluid multiplex PCR sepsis meningitis rapid identification |
url |
http://www.egms.de/static/en/journals/id/2016-4/id000024.shtml |
work_keys_str_mv |
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