Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus

Raman microspectra combine information on chemical composition of plant tissues with spatial information. The contributions from the building blocks of the cell walls in the Raman spectra of plant tissues can vary in the microscopic sub-structures of the tissue. Here, we discuss the analysis of 55 R...

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Main Authors: Ingrid Zeise, Zsuzsanna Heiner, Sabine Holz, Maike Joester, Carmen Büttner, Janina Kneipp
Format: Article
Language:English
Published: MDPI AG 2018-01-01
Series:Plants
Subjects:
Online Access:http://www.mdpi.com/2223-7747/7/1/7
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spelling doaj-fe9c01424cbe4f2cbf5c9101943b16ab2020-11-24T22:54:14ZengMDPI AGPlants2223-77472018-01-0171710.3390/plants7010007plants7010007Raman Imaging of Plant Cell Walls in Sections of Cucumis sativusIngrid Zeise0Zsuzsanna Heiner1Sabine Holz2Maike Joester3Carmen Büttner4Janina Kneipp5Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, GermanyDepartment of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, GermanyInstitute of Agricultural and Horticultural Sciences, Humboldt-Universität zu Berlin, Lentzeallee 55/57, 14195 Berlin, GermanyDepartment of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, GermanyInstitute of Agricultural and Horticultural Sciences, Humboldt-Universität zu Berlin, Lentzeallee 55/57, 14195 Berlin, GermanyDepartment of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, GermanyRaman microspectra combine information on chemical composition of plant tissues with spatial information. The contributions from the building blocks of the cell walls in the Raman spectra of plant tissues can vary in the microscopic sub-structures of the tissue. Here, we discuss the analysis of 55 Raman maps of root, stem, and leaf tissues of Cucumis sativus, using different spectral contributions from cellulose and lignin in both univariate and multivariate imaging methods. Imaging based on hierarchical cluster analysis (HCA) and principal component analysis (PCA) indicates different substructures in the xylem cell walls of the different tissues. Using specific signals from the cell wall spectra, analysis of the whole set of different tissue sections based on the Raman images reveals differences in xylem tissue morphology. Due to the specifics of excitation of the Raman spectra in the visible wavelength range (532 nm), which is, e.g., in resonance with carotenoid species, effects of photobleaching and the possibility of exploiting depletion difference spectra for molecular characterization in Raman imaging of plants are discussed. The reported results provide both, specific information on the molecular composition of cucumber tissue Raman spectra, and general directions for future imaging studies in plant tissues.http://www.mdpi.com/2223-7747/7/1/7Cucumis sativuscell wallxylemRaman spectroscopychemical imagingcelluloseligninprincipal component analysishierarchical cluster analysiscarotene
collection DOAJ
language English
format Article
sources DOAJ
author Ingrid Zeise
Zsuzsanna Heiner
Sabine Holz
Maike Joester
Carmen Büttner
Janina Kneipp
spellingShingle Ingrid Zeise
Zsuzsanna Heiner
Sabine Holz
Maike Joester
Carmen Büttner
Janina Kneipp
Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus
Plants
Cucumis sativus
cell wall
xylem
Raman spectroscopy
chemical imaging
cellulose
lignin
principal component analysis
hierarchical cluster analysis
carotene
author_facet Ingrid Zeise
Zsuzsanna Heiner
Sabine Holz
Maike Joester
Carmen Büttner
Janina Kneipp
author_sort Ingrid Zeise
title Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus
title_short Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus
title_full Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus
title_fullStr Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus
title_full_unstemmed Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus
title_sort raman imaging of plant cell walls in sections of cucumis sativus
publisher MDPI AG
series Plants
issn 2223-7747
publishDate 2018-01-01
description Raman microspectra combine information on chemical composition of plant tissues with spatial information. The contributions from the building blocks of the cell walls in the Raman spectra of plant tissues can vary in the microscopic sub-structures of the tissue. Here, we discuss the analysis of 55 Raman maps of root, stem, and leaf tissues of Cucumis sativus, using different spectral contributions from cellulose and lignin in both univariate and multivariate imaging methods. Imaging based on hierarchical cluster analysis (HCA) and principal component analysis (PCA) indicates different substructures in the xylem cell walls of the different tissues. Using specific signals from the cell wall spectra, analysis of the whole set of different tissue sections based on the Raman images reveals differences in xylem tissue morphology. Due to the specifics of excitation of the Raman spectra in the visible wavelength range (532 nm), which is, e.g., in resonance with carotenoid species, effects of photobleaching and the possibility of exploiting depletion difference spectra for molecular characterization in Raman imaging of plants are discussed. The reported results provide both, specific information on the molecular composition of cucumber tissue Raman spectra, and general directions for future imaging studies in plant tissues.
topic Cucumis sativus
cell wall
xylem
Raman spectroscopy
chemical imaging
cellulose
lignin
principal component analysis
hierarchical cluster analysis
carotene
url http://www.mdpi.com/2223-7747/7/1/7
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