Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus
Raman microspectra combine information on chemical composition of plant tissues with spatial information. The contributions from the building blocks of the cell walls in the Raman spectra of plant tissues can vary in the microscopic sub-structures of the tissue. Here, we discuss the analysis of 55 R...
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doaj-fe9c01424cbe4f2cbf5c9101943b16ab2020-11-24T22:54:14ZengMDPI AGPlants2223-77472018-01-0171710.3390/plants7010007plants7010007Raman Imaging of Plant Cell Walls in Sections of Cucumis sativusIngrid Zeise0Zsuzsanna Heiner1Sabine Holz2Maike Joester3Carmen Büttner4Janina Kneipp5Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, GermanyDepartment of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, GermanyInstitute of Agricultural and Horticultural Sciences, Humboldt-Universität zu Berlin, Lentzeallee 55/57, 14195 Berlin, GermanyDepartment of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, GermanyInstitute of Agricultural and Horticultural Sciences, Humboldt-Universität zu Berlin, Lentzeallee 55/57, 14195 Berlin, GermanyDepartment of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, GermanyRaman microspectra combine information on chemical composition of plant tissues with spatial information. The contributions from the building blocks of the cell walls in the Raman spectra of plant tissues can vary in the microscopic sub-structures of the tissue. Here, we discuss the analysis of 55 Raman maps of root, stem, and leaf tissues of Cucumis sativus, using different spectral contributions from cellulose and lignin in both univariate and multivariate imaging methods. Imaging based on hierarchical cluster analysis (HCA) and principal component analysis (PCA) indicates different substructures in the xylem cell walls of the different tissues. Using specific signals from the cell wall spectra, analysis of the whole set of different tissue sections based on the Raman images reveals differences in xylem tissue morphology. Due to the specifics of excitation of the Raman spectra in the visible wavelength range (532 nm), which is, e.g., in resonance with carotenoid species, effects of photobleaching and the possibility of exploiting depletion difference spectra for molecular characterization in Raman imaging of plants are discussed. The reported results provide both, specific information on the molecular composition of cucumber tissue Raman spectra, and general directions for future imaging studies in plant tissues.http://www.mdpi.com/2223-7747/7/1/7Cucumis sativuscell wallxylemRaman spectroscopychemical imagingcelluloseligninprincipal component analysishierarchical cluster analysiscarotene |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Ingrid Zeise Zsuzsanna Heiner Sabine Holz Maike Joester Carmen Büttner Janina Kneipp |
spellingShingle |
Ingrid Zeise Zsuzsanna Heiner Sabine Holz Maike Joester Carmen Büttner Janina Kneipp Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus Plants Cucumis sativus cell wall xylem Raman spectroscopy chemical imaging cellulose lignin principal component analysis hierarchical cluster analysis carotene |
author_facet |
Ingrid Zeise Zsuzsanna Heiner Sabine Holz Maike Joester Carmen Büttner Janina Kneipp |
author_sort |
Ingrid Zeise |
title |
Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus |
title_short |
Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus |
title_full |
Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus |
title_fullStr |
Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus |
title_full_unstemmed |
Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus |
title_sort |
raman imaging of plant cell walls in sections of cucumis sativus |
publisher |
MDPI AG |
series |
Plants |
issn |
2223-7747 |
publishDate |
2018-01-01 |
description |
Raman microspectra combine information on chemical composition of plant tissues with spatial information. The contributions from the building blocks of the cell walls in the Raman spectra of plant tissues can vary in the microscopic sub-structures of the tissue. Here, we discuss the analysis of 55 Raman maps of root, stem, and leaf tissues of Cucumis sativus, using different spectral contributions from cellulose and lignin in both univariate and multivariate imaging methods. Imaging based on hierarchical cluster analysis (HCA) and principal component analysis (PCA) indicates different substructures in the xylem cell walls of the different tissues. Using specific signals from the cell wall spectra, analysis of the whole set of different tissue sections based on the Raman images reveals differences in xylem tissue morphology. Due to the specifics of excitation of the Raman spectra in the visible wavelength range (532 nm), which is, e.g., in resonance with carotenoid species, effects of photobleaching and the possibility of exploiting depletion difference spectra for molecular characterization in Raman imaging of plants are discussed. The reported results provide both, specific information on the molecular composition of cucumber tissue Raman spectra, and general directions for future imaging studies in plant tissues. |
topic |
Cucumis sativus cell wall xylem Raman spectroscopy chemical imaging cellulose lignin principal component analysis hierarchical cluster analysis carotene |
url |
http://www.mdpi.com/2223-7747/7/1/7 |
work_keys_str_mv |
AT ingridzeise ramanimagingofplantcellwallsinsectionsofcucumissativus AT zsuzsannaheiner ramanimagingofplantcellwallsinsectionsofcucumissativus AT sabineholz ramanimagingofplantcellwallsinsectionsofcucumissativus AT maikejoester ramanimagingofplantcellwallsinsectionsofcucumissativus AT carmenbuttner ramanimagingofplantcellwallsinsectionsofcucumissativus AT janinakneipp ramanimagingofplantcellwallsinsectionsofcucumissativus |
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1725661286877888512 |