SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network
This paper proposes a novel siamese cross contrast neural network (SCCNN) to classify the hepatocellular carcinoma (HCC) and the intrahepatic cholangiocarcinoma (ICC) on computed tomography (CT) images. This method is inspired from cross contrast neural networks (CCNN) which is based on tailored CNN...
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doaj-fe365faca9954e03beaf2949cc84b69e2021-03-30T02:27:06ZengIEEEIEEE Access2169-35362020-01-018852718528310.1109/ACCESS.2020.29926279086453SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural NetworkQiyuan Wang0https://orcid.org/0000-0001-5976-3270Zhongmin Wang1Yu Sun2Xin Zhang3Weifeng Li4Yun Ge5Xiaolin Huang6Yun Liu7Ying Chen8https://orcid.org/0000-0003-1722-2868School of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaDepartment of Information, First Affiliated Hospital of Nanjing Medical University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaDepartment of Information, First Affiliated Hospital of Nanjing Medical University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaThis paper proposes a novel siamese cross contrast neural network (SCCNN) to classify the hepatocellular carcinoma (HCC) and the intrahepatic cholangiocarcinoma (ICC) on computed tomography (CT) images. This method is inspired from cross contrast neural networks (CCNN) which is based on tailored CNN and information based similarity(IBS) theory. A new IBS-based measurement named as discriminative IBS(DisIBS) is designed for SCCNN. SCCNN is composed of two main parts including siamese feature extractors with DisIBS operator and MLP classifiers. Siamese networks extract features with DisIBS calculated by DisIBS operator as metric at the top. MLP classifiers are connected with but gradient-stop to feature extractors deriving classification results. We assign different loss functions with different parts to make better practice, specially DisIBS-based loss for feature extractors and softmax-based for MLP classifiers. SCCNN preserves the advantages of CCNN that can fit the insufficient medical images and small lesions. Furthermore, it extends CCNN with the siamese mechanism and gradient-stop MLP classifiers to accept the random inputs and predict like traditional CNN. To present the effectiveness of SCCNN empirically, we apply this method on a 234-person (157/77 for train/test) dataset and achieve better results than other classic CNN and CCNN methods. We try different base models of siamese structures and display prediction accuracy in two levels (slice/patient). The highest slice/patient accuracy which we have achieved on three-categories classification (HCC/ICC/Normal) is 90.22%/94.92% and the accuracy rises to 94.17%/97.44% on binary classification(HCC/ICC).https://ieeexplore.ieee.org/document/9086453/Siamese networksmultiple losscross contrast neural networkshepatocellular carcinomaintrahepatic cholangiocarcinoma |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Qiyuan Wang Zhongmin Wang Yu Sun Xin Zhang Weifeng Li Yun Ge Xiaolin Huang Yun Liu Ying Chen |
spellingShingle |
Qiyuan Wang Zhongmin Wang Yu Sun Xin Zhang Weifeng Li Yun Ge Xiaolin Huang Yun Liu Ying Chen SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network IEEE Access Siamese networks multiple loss cross contrast neural networks hepatocellular carcinoma intrahepatic cholangiocarcinoma |
author_facet |
Qiyuan Wang Zhongmin Wang Yu Sun Xin Zhang Weifeng Li Yun Ge Xiaolin Huang Yun Liu Ying Chen |
author_sort |
Qiyuan Wang |
title |
SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network |
title_short |
SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network |
title_full |
SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network |
title_fullStr |
SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network |
title_full_unstemmed |
SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network |
title_sort |
sccnn: a diagnosis method for hepatocellular carcinoma and intrahepatic cholangiocarcinoma based on siamese cross contrast neural network |
publisher |
IEEE |
series |
IEEE Access |
issn |
2169-3536 |
publishDate |
2020-01-01 |
description |
This paper proposes a novel siamese cross contrast neural network (SCCNN) to classify the hepatocellular carcinoma (HCC) and the intrahepatic cholangiocarcinoma (ICC) on computed tomography (CT) images. This method is inspired from cross contrast neural networks (CCNN) which is based on tailored CNN and information based similarity(IBS) theory. A new IBS-based measurement named as discriminative IBS(DisIBS) is designed for SCCNN. SCCNN is composed of two main parts including siamese feature extractors with DisIBS operator and MLP classifiers. Siamese networks extract features with DisIBS calculated by DisIBS operator as metric at the top. MLP classifiers are connected with but gradient-stop to feature extractors deriving classification results. We assign different loss functions with different parts to make better practice, specially DisIBS-based loss for feature extractors and softmax-based for MLP classifiers. SCCNN preserves the advantages of CCNN that can fit the insufficient medical images and small lesions. Furthermore, it extends CCNN with the siamese mechanism and gradient-stop MLP classifiers to accept the random inputs and predict like traditional CNN. To present the effectiveness of SCCNN empirically, we apply this method on a 234-person (157/77 for train/test) dataset and achieve better results than other classic CNN and CCNN methods. We try different base models of siamese structures and display prediction accuracy in two levels (slice/patient). The highest slice/patient accuracy which we have achieved on three-categories classification (HCC/ICC/Normal) is 90.22%/94.92% and the accuracy rises to 94.17%/97.44% on binary classification(HCC/ICC). |
topic |
Siamese networks multiple loss cross contrast neural networks hepatocellular carcinoma intrahepatic cholangiocarcinoma |
url |
https://ieeexplore.ieee.org/document/9086453/ |
work_keys_str_mv |
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