SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network

This paper proposes a novel siamese cross contrast neural network (SCCNN) to classify the hepatocellular carcinoma (HCC) and the intrahepatic cholangiocarcinoma (ICC) on computed tomography (CT) images. This method is inspired from cross contrast neural networks (CCNN) which is based on tailored CNN...

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Main Authors: Qiyuan Wang, Zhongmin Wang, Yu Sun, Xin Zhang, Weifeng Li, Yun Ge, Xiaolin Huang, Yun Liu, Ying Chen
Format: Article
Language:English
Published: IEEE 2020-01-01
Series:IEEE Access
Subjects:
Online Access:https://ieeexplore.ieee.org/document/9086453/
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spelling doaj-fe365faca9954e03beaf2949cc84b69e2021-03-30T02:27:06ZengIEEEIEEE Access2169-35362020-01-018852718528310.1109/ACCESS.2020.29926279086453SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural NetworkQiyuan Wang0https://orcid.org/0000-0001-5976-3270Zhongmin Wang1Yu Sun2Xin Zhang3Weifeng Li4Yun Ge5Xiaolin Huang6Yun Liu7Ying Chen8https://orcid.org/0000-0003-1722-2868School of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaDepartment of Information, First Affiliated Hospital of Nanjing Medical University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaDepartment of Information, First Affiliated Hospital of Nanjing Medical University, Nanjing, ChinaSchool of Electronic Science and Engineering, Nanjing University, Nanjing, ChinaThis paper proposes a novel siamese cross contrast neural network (SCCNN) to classify the hepatocellular carcinoma (HCC) and the intrahepatic cholangiocarcinoma (ICC) on computed tomography (CT) images. This method is inspired from cross contrast neural networks (CCNN) which is based on tailored CNN and information based similarity(IBS) theory. A new IBS-based measurement named as discriminative IBS(DisIBS) is designed for SCCNN. SCCNN is composed of two main parts including siamese feature extractors with DisIBS operator and MLP classifiers. Siamese networks extract features with DisIBS calculated by DisIBS operator as metric at the top. MLP classifiers are connected with but gradient-stop to feature extractors deriving classification results. We assign different loss functions with different parts to make better practice, specially DisIBS-based loss for feature extractors and softmax-based for MLP classifiers. SCCNN preserves the advantages of CCNN that can fit the insufficient medical images and small lesions. Furthermore, it extends CCNN with the siamese mechanism and gradient-stop MLP classifiers to accept the random inputs and predict like traditional CNN. To present the effectiveness of SCCNN empirically, we apply this method on a 234-person (157/77 for train/test) dataset and achieve better results than other classic CNN and CCNN methods. We try different base models of siamese structures and display prediction accuracy in two levels (slice/patient). The highest slice/patient accuracy which we have achieved on three-categories classification (HCC/ICC/Normal) is 90.22%/94.92% and the accuracy rises to 94.17%/97.44% on binary classification(HCC/ICC).https://ieeexplore.ieee.org/document/9086453/Siamese networksmultiple losscross contrast neural networkshepatocellular carcinomaintrahepatic cholangiocarcinoma
collection DOAJ
language English
format Article
sources DOAJ
author Qiyuan Wang
Zhongmin Wang
Yu Sun
Xin Zhang
Weifeng Li
Yun Ge
Xiaolin Huang
Yun Liu
Ying Chen
spellingShingle Qiyuan Wang
Zhongmin Wang
Yu Sun
Xin Zhang
Weifeng Li
Yun Ge
Xiaolin Huang
Yun Liu
Ying Chen
SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network
IEEE Access
Siamese networks
multiple loss
cross contrast neural networks
hepatocellular carcinoma
intrahepatic cholangiocarcinoma
author_facet Qiyuan Wang
Zhongmin Wang
Yu Sun
Xin Zhang
Weifeng Li
Yun Ge
Xiaolin Huang
Yun Liu
Ying Chen
author_sort Qiyuan Wang
title SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network
title_short SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network
title_full SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network
title_fullStr SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network
title_full_unstemmed SCCNN: A Diagnosis Method for Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma Based on Siamese Cross Contrast Neural Network
title_sort sccnn: a diagnosis method for hepatocellular carcinoma and intrahepatic cholangiocarcinoma based on siamese cross contrast neural network
publisher IEEE
series IEEE Access
issn 2169-3536
publishDate 2020-01-01
description This paper proposes a novel siamese cross contrast neural network (SCCNN) to classify the hepatocellular carcinoma (HCC) and the intrahepatic cholangiocarcinoma (ICC) on computed tomography (CT) images. This method is inspired from cross contrast neural networks (CCNN) which is based on tailored CNN and information based similarity(IBS) theory. A new IBS-based measurement named as discriminative IBS(DisIBS) is designed for SCCNN. SCCNN is composed of two main parts including siamese feature extractors with DisIBS operator and MLP classifiers. Siamese networks extract features with DisIBS calculated by DisIBS operator as metric at the top. MLP classifiers are connected with but gradient-stop to feature extractors deriving classification results. We assign different loss functions with different parts to make better practice, specially DisIBS-based loss for feature extractors and softmax-based for MLP classifiers. SCCNN preserves the advantages of CCNN that can fit the insufficient medical images and small lesions. Furthermore, it extends CCNN with the siamese mechanism and gradient-stop MLP classifiers to accept the random inputs and predict like traditional CNN. To present the effectiveness of SCCNN empirically, we apply this method on a 234-person (157/77 for train/test) dataset and achieve better results than other classic CNN and CCNN methods. We try different base models of siamese structures and display prediction accuracy in two levels (slice/patient). The highest slice/patient accuracy which we have achieved on three-categories classification (HCC/ICC/Normal) is 90.22%/94.92% and the accuracy rises to 94.17%/97.44% on binary classification(HCC/ICC).
topic Siamese networks
multiple loss
cross contrast neural networks
hepatocellular carcinoma
intrahepatic cholangiocarcinoma
url https://ieeexplore.ieee.org/document/9086453/
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