Heterologous Hsp90 promotes phenotypic diversity through network evolution.

Biological processes in living cells are often carried out by gene networks in which signals and reactions are integrated through network hubs. Despite their functional importance, it remains unclear to what extent network hubs are evolvable and how alterations impact long-term evolution. We investi...

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Main Authors: Tracy Chih-Ting Koubkova-Yu, Jung-Chi Chao, Jun-Yi Leu
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2018-11-01
Series:PLoS Biology
Online Access:https://doi.org/10.1371/journal.pbio.2006450
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spelling doaj-fe08ce95416d4a53a2afefeb90b54e572021-07-02T16:27:03ZengPublic Library of Science (PLoS)PLoS Biology1544-91731545-78852018-11-011611e200645010.1371/journal.pbio.2006450Heterologous Hsp90 promotes phenotypic diversity through network evolution.Tracy Chih-Ting Koubkova-YuJung-Chi ChaoJun-Yi LeuBiological processes in living cells are often carried out by gene networks in which signals and reactions are integrated through network hubs. Despite their functional importance, it remains unclear to what extent network hubs are evolvable and how alterations impact long-term evolution. We investigated these issues using heat shock protein 90 (Hsp90), a central hub of proteostasis networks. When native Hsp90 in Saccharomyces cerevisiae cells was replaced by the ortholog from hypersaline-tolerant Yarrowia lipolytica that diverged from S. cerevisiae about 270 million years ago, the cells exhibited improved growth in hypersaline environments but compromised growth in others, indicating functional divergence in Hsp90 between the two yeasts. Laboratory evolution shows that evolved Y. lipolytica-HSP90-carrying S. cerevisiae cells exhibit a wider range of phenotypic variation than cells carrying native Hsp90. Identified beneficial mutations are involved in multiple pathways and are often pleiotropic. Our results show that cells adapt to a heterologous Hsp90 by modifying different subnetworks, facilitating the evolution of phenotypic diversity inaccessible to wild-type cells.https://doi.org/10.1371/journal.pbio.2006450
collection DOAJ
language English
format Article
sources DOAJ
author Tracy Chih-Ting Koubkova-Yu
Jung-Chi Chao
Jun-Yi Leu
spellingShingle Tracy Chih-Ting Koubkova-Yu
Jung-Chi Chao
Jun-Yi Leu
Heterologous Hsp90 promotes phenotypic diversity through network evolution.
PLoS Biology
author_facet Tracy Chih-Ting Koubkova-Yu
Jung-Chi Chao
Jun-Yi Leu
author_sort Tracy Chih-Ting Koubkova-Yu
title Heterologous Hsp90 promotes phenotypic diversity through network evolution.
title_short Heterologous Hsp90 promotes phenotypic diversity through network evolution.
title_full Heterologous Hsp90 promotes phenotypic diversity through network evolution.
title_fullStr Heterologous Hsp90 promotes phenotypic diversity through network evolution.
title_full_unstemmed Heterologous Hsp90 promotes phenotypic diversity through network evolution.
title_sort heterologous hsp90 promotes phenotypic diversity through network evolution.
publisher Public Library of Science (PLoS)
series PLoS Biology
issn 1544-9173
1545-7885
publishDate 2018-11-01
description Biological processes in living cells are often carried out by gene networks in which signals and reactions are integrated through network hubs. Despite their functional importance, it remains unclear to what extent network hubs are evolvable and how alterations impact long-term evolution. We investigated these issues using heat shock protein 90 (Hsp90), a central hub of proteostasis networks. When native Hsp90 in Saccharomyces cerevisiae cells was replaced by the ortholog from hypersaline-tolerant Yarrowia lipolytica that diverged from S. cerevisiae about 270 million years ago, the cells exhibited improved growth in hypersaline environments but compromised growth in others, indicating functional divergence in Hsp90 between the two yeasts. Laboratory evolution shows that evolved Y. lipolytica-HSP90-carrying S. cerevisiae cells exhibit a wider range of phenotypic variation than cells carrying native Hsp90. Identified beneficial mutations are involved in multiple pathways and are often pleiotropic. Our results show that cells adapt to a heterologous Hsp90 by modifying different subnetworks, facilitating the evolution of phenotypic diversity inaccessible to wild-type cells.
url https://doi.org/10.1371/journal.pbio.2006450
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