<b>Use of microsatellite markers to assess the identity and genetic diversity of <i>Vitis labrusca</i> and <i>Vitis rotundifolia</i> cultivars

Ten grapevine cultivars were genotyped at eight microsatellite loci to characterize their identity and genetic diversity. Of these, nine cultivar profiles matched with those of databases and ‘Magoon’ matched with ‘Regale’ in the present study and ‘Regale’ in the University of California (Davis) data...

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Main Authors: Mariane Ruzza Schuck, Luiz Antonio Biasi, Flavia Maia Moreira, Aparecido Lima da Silva, Summaira Riaz, Michael Andrew Walker
Format: Article
Language:English
Published: Eduem (Editora da Universidade Estadual de Maringá) 2014-07-01
Series:Acta Scientiarum: Agronomy
Subjects:
Online Access:http://186.233.154.254/ojs/index.php/ActaSciAgron/article/view/17869
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spelling doaj-fd5d306e1aa34f589c253ea64fda4cfb2020-11-25T01:35:17ZengEduem (Editora da Universidade Estadual de Maringá)Acta Scientiarum: Agronomy1679-92751807-86212014-07-0136330130810.4025/actasciagron.v36i3.1786910791<b>Use of microsatellite markers to assess the identity and genetic diversity of <i>Vitis labrusca</i> and <i>Vitis rotundifolia</i> cultivarsMariane Ruzza Schuck0Luiz Antonio Biasi1Flavia Maia Moreira2Aparecido Lima da Silva3Summaira Riaz4Michael Andrew Walker5Universidade Federal do ParanáUniversidade Federal do ParanáInstituto Federal de Educação, Ciência e Tecnologia de Santa CatarinaUniversidade Federal de Santa CatarinaUniversity of CaliforniaUniversity of CaliforniaTen grapevine cultivars were genotyped at eight microsatellite loci to characterize their identity and genetic diversity. Of these, nine cultivar profiles matched with those of databases and ‘Magoon’ matched with ‘Regale’ in the present study and ‘Regale’ in the University of California (Davis) database, implicating a likely error in planting. The number of alleles ranged from 5 (VVM5) to 9 (VVMD31), and the observed heterozygosity ranged from 37.14 (VVMD5) to 97.14% (VVMD27), with no significant differences in relation to the expected values for any of the loci, with the exception of VVMD5. The polymorphism information content values were observed to be above 0.25 in more than 85% of the loci analyzed, and VVMD31 was the most informative. The UPGMA analysis clustered the cultivars into two distinct groups. Within each group, the most divergent cultivars were ‘Bountiful’ (V. rotundifolia) and ‘Goethe’ (V. labrusca), also exhibiting the largest number of private alleles, 4 and 7, respectively. When comparing the two groups, the most divergent accessions were ‘Bountiful’ and ‘Bordo’, with the highest Nei distance. It was demonstrated that there is sufficient genetic variability in the cultivars used in this study to support breeding programs.http://186.233.154.254/ojs/index.php/ActaSciAgron/article/view/17869grapevinegenetic variabilitymolecular marker
collection DOAJ
language English
format Article
sources DOAJ
author Mariane Ruzza Schuck
Luiz Antonio Biasi
Flavia Maia Moreira
Aparecido Lima da Silva
Summaira Riaz
Michael Andrew Walker
spellingShingle Mariane Ruzza Schuck
Luiz Antonio Biasi
Flavia Maia Moreira
Aparecido Lima da Silva
Summaira Riaz
Michael Andrew Walker
<b>Use of microsatellite markers to assess the identity and genetic diversity of <i>Vitis labrusca</i> and <i>Vitis rotundifolia</i> cultivars
Acta Scientiarum: Agronomy
grapevine
genetic variability
molecular marker
author_facet Mariane Ruzza Schuck
Luiz Antonio Biasi
Flavia Maia Moreira
Aparecido Lima da Silva
Summaira Riaz
Michael Andrew Walker
author_sort Mariane Ruzza Schuck
title <b>Use of microsatellite markers to assess the identity and genetic diversity of <i>Vitis labrusca</i> and <i>Vitis rotundifolia</i> cultivars
title_short <b>Use of microsatellite markers to assess the identity and genetic diversity of <i>Vitis labrusca</i> and <i>Vitis rotundifolia</i> cultivars
title_full <b>Use of microsatellite markers to assess the identity and genetic diversity of <i>Vitis labrusca</i> and <i>Vitis rotundifolia</i> cultivars
title_fullStr <b>Use of microsatellite markers to assess the identity and genetic diversity of <i>Vitis labrusca</i> and <i>Vitis rotundifolia</i> cultivars
title_full_unstemmed <b>Use of microsatellite markers to assess the identity and genetic diversity of <i>Vitis labrusca</i> and <i>Vitis rotundifolia</i> cultivars
title_sort <b>use of microsatellite markers to assess the identity and genetic diversity of <i>vitis labrusca</i> and <i>vitis rotundifolia</i> cultivars
publisher Eduem (Editora da Universidade Estadual de Maringá)
series Acta Scientiarum: Agronomy
issn 1679-9275
1807-8621
publishDate 2014-07-01
description Ten grapevine cultivars were genotyped at eight microsatellite loci to characterize their identity and genetic diversity. Of these, nine cultivar profiles matched with those of databases and ‘Magoon’ matched with ‘Regale’ in the present study and ‘Regale’ in the University of California (Davis) database, implicating a likely error in planting. The number of alleles ranged from 5 (VVM5) to 9 (VVMD31), and the observed heterozygosity ranged from 37.14 (VVMD5) to 97.14% (VVMD27), with no significant differences in relation to the expected values for any of the loci, with the exception of VVMD5. The polymorphism information content values were observed to be above 0.25 in more than 85% of the loci analyzed, and VVMD31 was the most informative. The UPGMA analysis clustered the cultivars into two distinct groups. Within each group, the most divergent cultivars were ‘Bountiful’ (V. rotundifolia) and ‘Goethe’ (V. labrusca), also exhibiting the largest number of private alleles, 4 and 7, respectively. When comparing the two groups, the most divergent accessions were ‘Bountiful’ and ‘Bordo’, with the highest Nei distance. It was demonstrated that there is sufficient genetic variability in the cultivars used in this study to support breeding programs.
topic grapevine
genetic variability
molecular marker
url http://186.233.154.254/ojs/index.php/ActaSciAgron/article/view/17869
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