Identification of distant drug off-targets by direct superposition of binding pocket surfaces.
Correctly predicting off-targets for a given molecular structure, which would have the ability to bind a large range of ligands, is both particularly difficult and important if they share no significant sequence or fold similarity with the respective molecular target ("distant off-targets"...
Main Authors: | Marcel Schumann, Roger S Armen |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2013-01-01
|
Series: | PLoS ONE |
Online Access: | http://europepmc.org/articles/PMC3877058?pdf=render |
Similar Items
-
Ligand binding site superposition and comparison based on Atomic Property Fields: identification of distant homologues, convergent evolution and PDB-wide clustering of binding sites
by: Totrov Maxim
Published: (2011-02-01) -
Binding pocket optimization by computational protein design.
by: Christoph Malisi, et al.
Published: (2012-01-01) -
Exclusion of identification by negative superposition
by: Takač Šandor, et al.
Published: (2012-01-01) -
Imaging Off‐Resonance Nanomechanical Motion as Modal Superposition
by: Joshoua Condicion Esmenda, et al.
Published: (2021-07-01) -
Designing binding pockets on protein surfaces using the A* algorithm
by: Helms V, et al.
Published: (2009-06-01)