Caragana korshinskii phenylalanine ammonialyase is up-regulated in the phenylpropanoid biosynthesis pathway in response to drought stress

Drought is one of the most severe abiotic stresses, the damage due to which, various plant species mitigate by activating mechanisms that are not yet well understood. Caragana korshinskii is a xerophytic shrub found in the semi-arid regions of northwest China with high tolerance to several abiotic s...

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Main Authors: Furong Liu, Lifang Xie, Zhenye Yao, Yulu Zhou, Wenfei Zhou, Junhui Wang, Yingying Sun, Chunmei Gong
Format: Article
Language:English
Published: Taylor & Francis Group 2019-01-01
Series:Biotechnology & Biotechnological Equipment
Subjects:
Online Access:http://dx.doi.org/10.1080/13102818.2019.1623718
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spelling doaj-fd053ce1278241769fab5b13732f93802020-11-25T02:03:46ZengTaylor & Francis GroupBiotechnology & Biotechnological Equipment1310-28181314-35302019-01-0133184285410.1080/13102818.2019.16237181623718Caragana korshinskii phenylalanine ammonialyase is up-regulated in the phenylpropanoid biosynthesis pathway in response to drought stressFurong Liu0Lifang Xie1Zhenye Yao2Yulu Zhou3Wenfei Zhou4Junhui Wang5Yingying Sun6Chunmei Gong7Northwest A&F UniversityNorthwest A&F UniversityNorthwest A&F UniversityNorthwest A&F UniversityNorthwest A&F UniversityNorthwest A&F UniversityNorthwest A&F UniversityNorthwest A&F UniversityDrought is one of the most severe abiotic stresses, the damage due to which, various plant species mitigate by activating mechanisms that are not yet well understood. Caragana korshinskii is a xerophytic shrub found in the semi-arid regions of northwest China with high tolerance to several abiotic stresses, including drought. Based on the de novo transcriptome data from C. korshinskii leaflets collected along a precipitation gradient on the Loess Plateau (China), most of the differentially expressed genes were explored using trend analysis along the precipitation gradient. Gene ontological analysis showed that “phenylpropanoid biosynthesis process → secondary metabolite biosynthetic process” terms were the most significant gene ontologies, whereas Kyoto Encyclopedia of Genes and Genomes-based analysis indicated that the biosynthesis of secondary metabolites was a significant metabolic pathway. Real-time polymerase chain reaction and enzyme activity analyses confirmed the increased transcription of the phenylalanine ammonialyase (PAL) gene in C. korshinskii under drought stress in field and laboratory conditions. These results suggested that C. korshinskii adjusts its secondary metabolism to water-deficit environments and activates PAL by drought stress. Therefore, further studies on the obtained data can expand the current understanding of the molecular and genetic mechanisms responsible for the drought endurance in C. korshinskii.http://dx.doi.org/10.1080/13102818.2019.1623718caragana korshinskiidrought stresstranscriptomephenylalanine ammonialyase
collection DOAJ
language English
format Article
sources DOAJ
author Furong Liu
Lifang Xie
Zhenye Yao
Yulu Zhou
Wenfei Zhou
Junhui Wang
Yingying Sun
Chunmei Gong
spellingShingle Furong Liu
Lifang Xie
Zhenye Yao
Yulu Zhou
Wenfei Zhou
Junhui Wang
Yingying Sun
Chunmei Gong
Caragana korshinskii phenylalanine ammonialyase is up-regulated in the phenylpropanoid biosynthesis pathway in response to drought stress
Biotechnology & Biotechnological Equipment
caragana korshinskii
drought stress
transcriptome
phenylalanine ammonialyase
author_facet Furong Liu
Lifang Xie
Zhenye Yao
Yulu Zhou
Wenfei Zhou
Junhui Wang
Yingying Sun
Chunmei Gong
author_sort Furong Liu
title Caragana korshinskii phenylalanine ammonialyase is up-regulated in the phenylpropanoid biosynthesis pathway in response to drought stress
title_short Caragana korshinskii phenylalanine ammonialyase is up-regulated in the phenylpropanoid biosynthesis pathway in response to drought stress
title_full Caragana korshinskii phenylalanine ammonialyase is up-regulated in the phenylpropanoid biosynthesis pathway in response to drought stress
title_fullStr Caragana korshinskii phenylalanine ammonialyase is up-regulated in the phenylpropanoid biosynthesis pathway in response to drought stress
title_full_unstemmed Caragana korshinskii phenylalanine ammonialyase is up-regulated in the phenylpropanoid biosynthesis pathway in response to drought stress
title_sort caragana korshinskii phenylalanine ammonialyase is up-regulated in the phenylpropanoid biosynthesis pathway in response to drought stress
publisher Taylor & Francis Group
series Biotechnology & Biotechnological Equipment
issn 1310-2818
1314-3530
publishDate 2019-01-01
description Drought is one of the most severe abiotic stresses, the damage due to which, various plant species mitigate by activating mechanisms that are not yet well understood. Caragana korshinskii is a xerophytic shrub found in the semi-arid regions of northwest China with high tolerance to several abiotic stresses, including drought. Based on the de novo transcriptome data from C. korshinskii leaflets collected along a precipitation gradient on the Loess Plateau (China), most of the differentially expressed genes were explored using trend analysis along the precipitation gradient. Gene ontological analysis showed that “phenylpropanoid biosynthesis process → secondary metabolite biosynthetic process” terms were the most significant gene ontologies, whereas Kyoto Encyclopedia of Genes and Genomes-based analysis indicated that the biosynthesis of secondary metabolites was a significant metabolic pathway. Real-time polymerase chain reaction and enzyme activity analyses confirmed the increased transcription of the phenylalanine ammonialyase (PAL) gene in C. korshinskii under drought stress in field and laboratory conditions. These results suggested that C. korshinskii adjusts its secondary metabolism to water-deficit environments and activates PAL by drought stress. Therefore, further studies on the obtained data can expand the current understanding of the molecular and genetic mechanisms responsible for the drought endurance in C. korshinskii.
topic caragana korshinskii
drought stress
transcriptome
phenylalanine ammonialyase
url http://dx.doi.org/10.1080/13102818.2019.1623718
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