The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power
Abstract Species reproduction is an important determinant of population dynamics. As such, this is an important parameter in environmental risk assessment. The closure principle computational approach test (CPCAT) was recently proposed as a method to derive a NOEC/LOEC for reproduction count data su...
Main Authors: | , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
SpringerOpen
2018-12-01
|
Series: | Environmental Sciences Europe |
Subjects: | |
Online Access: | http://link.springer.com/article/10.1186/s12302-018-0178-5 |
id |
doaj-fcf12245e5744e10b78fde25a24699e7 |
---|---|
record_format |
Article |
spelling |
doaj-fcf12245e5744e10b78fde25a24699e72020-11-24T21:08:48ZengSpringerOpenEnvironmental Sciences Europe2190-47072190-47152018-12-013011810.1186/s12302-018-0178-5The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical powerRené Lehmann0Jean Bachmann1Bilgin Karaoglan2Jens Lacker3Glenn Lurman4Christian Polleichtner5Hans Toni Ratte6Monika Ratte7FOM Hochschule für Oekonomie & ManagementGerman Environment AgencyGerman Environment AgencyGerman Environment AgencyPrivate ScientistGerman Environment AgencyToxRat Solutions GmbH & Co KGToxRat Solutions GmbH & Co KGAbstract Species reproduction is an important determinant of population dynamics. As such, this is an important parameter in environmental risk assessment. The closure principle computational approach test (CPCAT) was recently proposed as a method to derive a NOEC/LOEC for reproduction count data such as the number of juvenile Daphnia. The Poisson distribution used by CPCAT can be too restrictive as a model of the data-generating process. In practice, the generalized Poisson distribution could be more appropriate, as it allows for inequality of the population mean $$\mu$$ μ and the population variance $$\sigma ^2$$ σ2 . It is of fundamental interest to explore the statistical power of CPCAT and the probability of determining a regulatory relevant effect correctly. Using a simulation, we varied between Poisson distribution ($$\mu =\sigma ^2$$ μ=σ2 ) and generalized Poisson distribution allowing for over-dispersion ($$\mu <\sigma ^2$$ μ<σ2 ) and under-dispersion ($$\mu >\sigma ^2$$ μ>σ2 ). The results indicated that the probability of detecting the LOEC/NOEC correctly was $$\ge 0.8$$ ≥0.8 provided the effect was at least 20% above or below the mean level of the control group and mean reproduction of the control was at least 50 individuals while over-dispersion was missing. Specifically, under-dispersion increased, whereas over-dispersion reduced the statistical power of the CPCAT. Using the well-known Hampel identifier, we propose a simple and straight forward method to assess whether the data-generating process of real data could be over- or under-dispersed.http://link.springer.com/article/10.1186/s12302-018-0178-5LOECGeneralized Poisson distributionSpecies reproductionClosure principle computational approach test (CPCAT) |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
René Lehmann Jean Bachmann Bilgin Karaoglan Jens Lacker Glenn Lurman Christian Polleichtner Hans Toni Ratte Monika Ratte |
spellingShingle |
René Lehmann Jean Bachmann Bilgin Karaoglan Jens Lacker Glenn Lurman Christian Polleichtner Hans Toni Ratte Monika Ratte The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power Environmental Sciences Europe LOEC Generalized Poisson distribution Species reproduction Closure principle computational approach test (CPCAT) |
author_facet |
René Lehmann Jean Bachmann Bilgin Karaoglan Jens Lacker Glenn Lurman Christian Polleichtner Hans Toni Ratte Monika Ratte |
author_sort |
René Lehmann |
title |
The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title_short |
The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title_full |
The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title_fullStr |
The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title_full_unstemmed |
The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title_sort |
cpcat as a novel tool to overcome the shortcomings of noec/loec statistics in ecotoxicology: a simulation study to evaluate the statistical power |
publisher |
SpringerOpen |
series |
Environmental Sciences Europe |
issn |
2190-4707 2190-4715 |
publishDate |
2018-12-01 |
description |
Abstract Species reproduction is an important determinant of population dynamics. As such, this is an important parameter in environmental risk assessment. The closure principle computational approach test (CPCAT) was recently proposed as a method to derive a NOEC/LOEC for reproduction count data such as the number of juvenile Daphnia. The Poisson distribution used by CPCAT can be too restrictive as a model of the data-generating process. In practice, the generalized Poisson distribution could be more appropriate, as it allows for inequality of the population mean $$\mu$$ μ and the population variance $$\sigma ^2$$ σ2 . It is of fundamental interest to explore the statistical power of CPCAT and the probability of determining a regulatory relevant effect correctly. Using a simulation, we varied between Poisson distribution ($$\mu =\sigma ^2$$ μ=σ2 ) and generalized Poisson distribution allowing for over-dispersion ($$\mu <\sigma ^2$$ μ<σ2 ) and under-dispersion ($$\mu >\sigma ^2$$ μ>σ2 ). The results indicated that the probability of detecting the LOEC/NOEC correctly was $$\ge 0.8$$ ≥0.8 provided the effect was at least 20% above or below the mean level of the control group and mean reproduction of the control was at least 50 individuals while over-dispersion was missing. Specifically, under-dispersion increased, whereas over-dispersion reduced the statistical power of the CPCAT. Using the well-known Hampel identifier, we propose a simple and straight forward method to assess whether the data-generating process of real data could be over- or under-dispersed. |
topic |
LOEC Generalized Poisson distribution Species reproduction Closure principle computational approach test (CPCAT) |
url |
http://link.springer.com/article/10.1186/s12302-018-0178-5 |
work_keys_str_mv |
AT renelehmann thecpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT jeanbachmann thecpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT bilginkaraoglan thecpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT jenslacker thecpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT glennlurman thecpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT christianpolleichtner thecpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT hanstoniratte thecpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT monikaratte thecpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT renelehmann cpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT jeanbachmann cpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT bilginkaraoglan cpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT jenslacker cpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT glennlurman cpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT christianpolleichtner cpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT hanstoniratte cpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower AT monikaratte cpcatasanoveltooltoovercometheshortcomingsofnoecloecstatisticsinecotoxicologyasimulationstudytoevaluatethestatisticalpower |
_version_ |
1716759346864455680 |