Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city

Abstract This study aimed at exploring microalgal heterogeneity from fresh water samples collected from inland water bodies in the heavily built city of Singapore. Culturable pure isolates (n = 94) were subject to an in-house microalgal DNA extraction method and LSU rDNA sequencing. Isolates were an...

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Main Authors: Charmaine Lloyd, Kai Heng Tan, Kar Leong Lim, Vimala Gana Valu, Sarah Mei Ying Fun, Teng Rong Chye, Hui Min Mak, Wei Xiong Sim, Sarah  Liyana Musa, Joscelyn Jun Quan Ng, Nazurah Syazana Bte Nordin, Nurhazlyn Bte Md Aidzil, Zephyr Yu Wen Eng, Punithavathy Manickavasagam, Jen Yan New
Format: Article
Language:English
Published: Nature Publishing Group 2021-02-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-021-84112-0
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spelling doaj-fc6a93cfa3144373a94a19881ebffff32021-03-11T12:18:12ZengNature Publishing GroupScientific Reports2045-23222021-02-011111610.1038/s41598-021-84112-0Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise cityCharmaine Lloyd0Kai Heng Tan1Kar Leong Lim2Vimala Gana Valu3Sarah Mei Ying Fun4Teng Rong Chye5Hui Min Mak6Wei Xiong Sim7Sarah  Liyana Musa8Joscelyn Jun Quan Ng9Nazurah Syazana Bte Nordin10Nurhazlyn Bte Md Aidzil11Zephyr Yu Wen Eng12Punithavathy Manickavasagam13Jen Yan New14School of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicAbstract This study aimed at exploring microalgal heterogeneity from fresh water samples collected from inland water bodies in the heavily built city of Singapore. Culturable pure isolates (n = 94) were subject to an in-house microalgal DNA extraction method and LSU rDNA sequencing. Isolates were analysed for their predominance and distribution. A total of 17 different algal genera were identified (H = 2.8, EH = 0.6), of which Scenedesmus spp. and Chlorella spp. constituted 27.5% and 21.3% of isolates respectively, followed by Micractinium spp. (18.8%) and Chlamydomonas spp. (12.5%). We also report 16 new microalgal strains from this region. The data is important from an ecological and biotechnological perspective.https://doi.org/10.1038/s41598-021-84112-0
collection DOAJ
language English
format Article
sources DOAJ
author Charmaine Lloyd
Kai Heng Tan
Kar Leong Lim
Vimala Gana Valu
Sarah Mei Ying Fun
Teng Rong Chye
Hui Min Mak
Wei Xiong Sim
Sarah  Liyana Musa
Joscelyn Jun Quan Ng
Nazurah Syazana Bte Nordin
Nurhazlyn Bte Md Aidzil
Zephyr Yu Wen Eng
Punithavathy Manickavasagam
Jen Yan New
spellingShingle Charmaine Lloyd
Kai Heng Tan
Kar Leong Lim
Vimala Gana Valu
Sarah Mei Ying Fun
Teng Rong Chye
Hui Min Mak
Wei Xiong Sim
Sarah  Liyana Musa
Joscelyn Jun Quan Ng
Nazurah Syazana Bte Nordin
Nurhazlyn Bte Md Aidzil
Zephyr Yu Wen Eng
Punithavathy Manickavasagam
Jen Yan New
Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city
Scientific Reports
author_facet Charmaine Lloyd
Kai Heng Tan
Kar Leong Lim
Vimala Gana Valu
Sarah Mei Ying Fun
Teng Rong Chye
Hui Min Mak
Wei Xiong Sim
Sarah  Liyana Musa
Joscelyn Jun Quan Ng
Nazurah Syazana Bte Nordin
Nurhazlyn Bte Md Aidzil
Zephyr Yu Wen Eng
Punithavathy Manickavasagam
Jen Yan New
author_sort Charmaine Lloyd
title Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city
title_short Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city
title_full Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city
title_fullStr Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city
title_full_unstemmed Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city
title_sort identification of microalgae cultured in bold’s basal medium from freshwater samples, from a high-rise city
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2021-02-01
description Abstract This study aimed at exploring microalgal heterogeneity from fresh water samples collected from inland water bodies in the heavily built city of Singapore. Culturable pure isolates (n = 94) were subject to an in-house microalgal DNA extraction method and LSU rDNA sequencing. Isolates were analysed for their predominance and distribution. A total of 17 different algal genera were identified (H = 2.8, EH = 0.6), of which Scenedesmus spp. and Chlorella spp. constituted 27.5% and 21.3% of isolates respectively, followed by Micractinium spp. (18.8%) and Chlamydomonas spp. (12.5%). We also report 16 new microalgal strains from this region. The data is important from an ecological and biotechnological perspective.
url https://doi.org/10.1038/s41598-021-84112-0
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