Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city
Abstract This study aimed at exploring microalgal heterogeneity from fresh water samples collected from inland water bodies in the heavily built city of Singapore. Culturable pure isolates (n = 94) were subject to an in-house microalgal DNA extraction method and LSU rDNA sequencing. Isolates were an...
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doaj-fc6a93cfa3144373a94a19881ebffff32021-03-11T12:18:12ZengNature Publishing GroupScientific Reports2045-23222021-02-011111610.1038/s41598-021-84112-0Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise cityCharmaine Lloyd0Kai Heng Tan1Kar Leong Lim2Vimala Gana Valu3Sarah Mei Ying Fun4Teng Rong Chye5Hui Min Mak6Wei Xiong Sim7Sarah Liyana Musa8Joscelyn Jun Quan Ng9Nazurah Syazana Bte Nordin10Nurhazlyn Bte Md Aidzil11Zephyr Yu Wen Eng12Punithavathy Manickavasagam13Jen Yan New14School of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicSchool of Life Sciences and Chemical Technology - Microalgal Research Group, Ngee Ann PolytechnicAbstract This study aimed at exploring microalgal heterogeneity from fresh water samples collected from inland water bodies in the heavily built city of Singapore. Culturable pure isolates (n = 94) were subject to an in-house microalgal DNA extraction method and LSU rDNA sequencing. Isolates were analysed for their predominance and distribution. A total of 17 different algal genera were identified (H = 2.8, EH = 0.6), of which Scenedesmus spp. and Chlorella spp. constituted 27.5% and 21.3% of isolates respectively, followed by Micractinium spp. (18.8%) and Chlamydomonas spp. (12.5%). We also report 16 new microalgal strains from this region. The data is important from an ecological and biotechnological perspective.https://doi.org/10.1038/s41598-021-84112-0 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Charmaine Lloyd Kai Heng Tan Kar Leong Lim Vimala Gana Valu Sarah Mei Ying Fun Teng Rong Chye Hui Min Mak Wei Xiong Sim Sarah Liyana Musa Joscelyn Jun Quan Ng Nazurah Syazana Bte Nordin Nurhazlyn Bte Md Aidzil Zephyr Yu Wen Eng Punithavathy Manickavasagam Jen Yan New |
spellingShingle |
Charmaine Lloyd Kai Heng Tan Kar Leong Lim Vimala Gana Valu Sarah Mei Ying Fun Teng Rong Chye Hui Min Mak Wei Xiong Sim Sarah Liyana Musa Joscelyn Jun Quan Ng Nazurah Syazana Bte Nordin Nurhazlyn Bte Md Aidzil Zephyr Yu Wen Eng Punithavathy Manickavasagam Jen Yan New Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city Scientific Reports |
author_facet |
Charmaine Lloyd Kai Heng Tan Kar Leong Lim Vimala Gana Valu Sarah Mei Ying Fun Teng Rong Chye Hui Min Mak Wei Xiong Sim Sarah Liyana Musa Joscelyn Jun Quan Ng Nazurah Syazana Bte Nordin Nurhazlyn Bte Md Aidzil Zephyr Yu Wen Eng Punithavathy Manickavasagam Jen Yan New |
author_sort |
Charmaine Lloyd |
title |
Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city |
title_short |
Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city |
title_full |
Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city |
title_fullStr |
Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city |
title_full_unstemmed |
Identification of microalgae cultured in Bold’s Basal medium from freshwater samples, from a high-rise city |
title_sort |
identification of microalgae cultured in bold’s basal medium from freshwater samples, from a high-rise city |
publisher |
Nature Publishing Group |
series |
Scientific Reports |
issn |
2045-2322 |
publishDate |
2021-02-01 |
description |
Abstract This study aimed at exploring microalgal heterogeneity from fresh water samples collected from inland water bodies in the heavily built city of Singapore. Culturable pure isolates (n = 94) were subject to an in-house microalgal DNA extraction method and LSU rDNA sequencing. Isolates were analysed for their predominance and distribution. A total of 17 different algal genera were identified (H = 2.8, EH = 0.6), of which Scenedesmus spp. and Chlorella spp. constituted 27.5% and 21.3% of isolates respectively, followed by Micractinium spp. (18.8%) and Chlamydomonas spp. (12.5%). We also report 16 new microalgal strains from this region. The data is important from an ecological and biotechnological perspective. |
url |
https://doi.org/10.1038/s41598-021-84112-0 |
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