Time-lapse imaging of HeLa spheroids in soft agar culture provides virtual inner proliferative activity.

Cancer is a complex disease caused by multiple types of interactions. To simplify and normalize the assessment of drug effects, spheroid microenvironments have been utilized. Research models that involve agent measurement with the examination of clonogenic survival by monitoring culture process with...

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Main Authors: Reiko Minamikawa-Tachino, Kiyoshi Ogura, Ayane Ito, Katsuya Nagayama
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2020-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0231774
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spelling doaj-fc2e0e62b58d4099a45e245bafb52dc42021-03-03T21:41:47ZengPublic Library of Science (PLoS)PLoS ONE1932-62032020-01-01154e023177410.1371/journal.pone.0231774Time-lapse imaging of HeLa spheroids in soft agar culture provides virtual inner proliferative activity.Reiko Minamikawa-TachinoKiyoshi OguraAyane ItoKatsuya NagayamaCancer is a complex disease caused by multiple types of interactions. To simplify and normalize the assessment of drug effects, spheroid microenvironments have been utilized. Research models that involve agent measurement with the examination of clonogenic survival by monitoring culture process with image analysis have been developed for spheroid-based screening. Meanwhile, computer simulations using various models have enabled better predictions for phenomena in cancer. However, user-based parameters that are specific to a researcher's own experimental conditions must be inputted. In order to bridge the gap between experimental and simulated conditions, we have developed an in silico analysis method with virtual three-dimensional embodiment computed using the researcher's own samples. The present work focused on HeLa spheroid growth in soft agar culture, with spheroids being modeled in silico based on time-lapse images capturing spheroid growth. The spheroids in silico were optimized by adjusting the growth curves to those obtained from time-lapse images of spheroids and were then assigned virtual inner proliferative activity by using generations assigned to each cellular particle. The ratio and distribution of the virtual inner proliferative activities were confirmed to be similar to the proliferation zone ratio and histochemical profiles of HeLa spheroids, which were also consistent with those identified in an earlier study. We validated that time-lapse images of HeLa spheroids provided virtual inner proliferative activity for spheroids in vitro. The present work has achieved the first step toward an in silico analysis method using computational simulation based on a researcher's own samples, helping to bridge the gap between experiment and simulation.https://doi.org/10.1371/journal.pone.0231774
collection DOAJ
language English
format Article
sources DOAJ
author Reiko Minamikawa-Tachino
Kiyoshi Ogura
Ayane Ito
Katsuya Nagayama
spellingShingle Reiko Minamikawa-Tachino
Kiyoshi Ogura
Ayane Ito
Katsuya Nagayama
Time-lapse imaging of HeLa spheroids in soft agar culture provides virtual inner proliferative activity.
PLoS ONE
author_facet Reiko Minamikawa-Tachino
Kiyoshi Ogura
Ayane Ito
Katsuya Nagayama
author_sort Reiko Minamikawa-Tachino
title Time-lapse imaging of HeLa spheroids in soft agar culture provides virtual inner proliferative activity.
title_short Time-lapse imaging of HeLa spheroids in soft agar culture provides virtual inner proliferative activity.
title_full Time-lapse imaging of HeLa spheroids in soft agar culture provides virtual inner proliferative activity.
title_fullStr Time-lapse imaging of HeLa spheroids in soft agar culture provides virtual inner proliferative activity.
title_full_unstemmed Time-lapse imaging of HeLa spheroids in soft agar culture provides virtual inner proliferative activity.
title_sort time-lapse imaging of hela spheroids in soft agar culture provides virtual inner proliferative activity.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2020-01-01
description Cancer is a complex disease caused by multiple types of interactions. To simplify and normalize the assessment of drug effects, spheroid microenvironments have been utilized. Research models that involve agent measurement with the examination of clonogenic survival by monitoring culture process with image analysis have been developed for spheroid-based screening. Meanwhile, computer simulations using various models have enabled better predictions for phenomena in cancer. However, user-based parameters that are specific to a researcher's own experimental conditions must be inputted. In order to bridge the gap between experimental and simulated conditions, we have developed an in silico analysis method with virtual three-dimensional embodiment computed using the researcher's own samples. The present work focused on HeLa spheroid growth in soft agar culture, with spheroids being modeled in silico based on time-lapse images capturing spheroid growth. The spheroids in silico were optimized by adjusting the growth curves to those obtained from time-lapse images of spheroids and were then assigned virtual inner proliferative activity by using generations assigned to each cellular particle. The ratio and distribution of the virtual inner proliferative activities were confirmed to be similar to the proliferation zone ratio and histochemical profiles of HeLa spheroids, which were also consistent with those identified in an earlier study. We validated that time-lapse images of HeLa spheroids provided virtual inner proliferative activity for spheroids in vitro. The present work has achieved the first step toward an in silico analysis method using computational simulation based on a researcher's own samples, helping to bridge the gap between experiment and simulation.
url https://doi.org/10.1371/journal.pone.0231774
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