Estimation of myocardial deformation using correlation image velocimetry
Abstract Background Tagged Magnetic Resonance (tMR) imaging is a powerful technique for determining cardiovascular abnormalities. One of the reasons for tMR not being used in routine clinical practice is the lack of easy-to-use tools for image analysis and strain mapping. In this paper, we introduce...
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doaj-fbaeeb47c35c4ac9b11a06bde7712dc32020-11-25T01:54:12ZengBMCBMC Medical Imaging1471-23422017-04-0117111310.1186/s12880-017-0195-7Estimation of myocardial deformation using correlation image velocimetryAthira Jacob0Ganapathy Krishnamurthi1Manikandan Mathur2Department of Engineering Design, Indian Institute of Technology MadrasDepartment of Engineering Design, Indian Institute of Technology MadrasDepartment of Aerospace Engineering, Indian Institute of Technology MadrasAbstract Background Tagged Magnetic Resonance (tMR) imaging is a powerful technique for determining cardiovascular abnormalities. One of the reasons for tMR not being used in routine clinical practice is the lack of easy-to-use tools for image analysis and strain mapping. In this paper, we introduce a novel interdisciplinary method based on correlation image velocimetry (CIV) to estimate cardiac deformation and strain maps from tMR images. Methods CIV, a cross-correlation based pattern matching algorithm, analyses a pair of images to obtain the displacement field at sub-pixel accuracy with any desired spatial resolution. This first time application of CIV to tMR image analysis is implemented using an existing open source Matlab-based software called UVMAT. The method, which requires two main input parameters namely correlation box size (C B ) and search box size (S B ), is first validated using a synthetic grid image with grid sizes representative of typical tMR images. Phantom and patient images obtained from a Medical Imaging grand challenge dataset ( http://stacom.cardiacatlas.org/motion-tracking-challenge/ ) were then analysed to obtain cardiac displacement fields and strain maps. The results were then compared with estimates from Harmonic Phase analysis (HARP) technique. Results For a known displacement field imposed on both the synthetic grid image and the phantom image, CIV is accurate for 3-pixel and larger displacements on a 512 × 512 image with (C B ,S B )=(25,55) pixels. Further validation of our method is achieved by showing that our estimated landmark positions on patient images fall within the inter-observer variability in the ground truth. The effectiveness of our approach to analyse patient images is then established by calculating dense displacement fields throughout a cardiac cycle, and were found to be physiologically consistent. Circumferential strains were estimated at the apical, mid and basal slices of the heart, and were shown to compare favorably with those of HARP over the entire cardiac cycle, except in a few (∼4) of the segments in the 17-segment AHA model. The radial strains, however, are underestimated by our method in most segments when compared with HARP. Conclusions In summary, we have demonstrated the capability of CIV to accurately and efficiently quantify cardiac deformation from tMR images. Furthermore, physiologically consistent displacement fields and circumferential strain curves in most regions of the heart indicate that our approach, upon automating some pre-processing steps and testing in clinical trials, can potentially be implemented in a clinical setting.http://link.springer.com/article/10.1186/s12880-017-0195-7Tagged magnetic resonance imagingCorrelation image velocimetryCardiac deformationCardiac strain |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Athira Jacob Ganapathy Krishnamurthi Manikandan Mathur |
spellingShingle |
Athira Jacob Ganapathy Krishnamurthi Manikandan Mathur Estimation of myocardial deformation using correlation image velocimetry BMC Medical Imaging Tagged magnetic resonance imaging Correlation image velocimetry Cardiac deformation Cardiac strain |
author_facet |
Athira Jacob Ganapathy Krishnamurthi Manikandan Mathur |
author_sort |
Athira Jacob |
title |
Estimation of myocardial deformation using correlation image velocimetry |
title_short |
Estimation of myocardial deformation using correlation image velocimetry |
title_full |
Estimation of myocardial deformation using correlation image velocimetry |
title_fullStr |
Estimation of myocardial deformation using correlation image velocimetry |
title_full_unstemmed |
Estimation of myocardial deformation using correlation image velocimetry |
title_sort |
estimation of myocardial deformation using correlation image velocimetry |
publisher |
BMC |
series |
BMC Medical Imaging |
issn |
1471-2342 |
publishDate |
2017-04-01 |
description |
Abstract Background Tagged Magnetic Resonance (tMR) imaging is a powerful technique for determining cardiovascular abnormalities. One of the reasons for tMR not being used in routine clinical practice is the lack of easy-to-use tools for image analysis and strain mapping. In this paper, we introduce a novel interdisciplinary method based on correlation image velocimetry (CIV) to estimate cardiac deformation and strain maps from tMR images. Methods CIV, a cross-correlation based pattern matching algorithm, analyses a pair of images to obtain the displacement field at sub-pixel accuracy with any desired spatial resolution. This first time application of CIV to tMR image analysis is implemented using an existing open source Matlab-based software called UVMAT. The method, which requires two main input parameters namely correlation box size (C B ) and search box size (S B ), is first validated using a synthetic grid image with grid sizes representative of typical tMR images. Phantom and patient images obtained from a Medical Imaging grand challenge dataset ( http://stacom.cardiacatlas.org/motion-tracking-challenge/ ) were then analysed to obtain cardiac displacement fields and strain maps. The results were then compared with estimates from Harmonic Phase analysis (HARP) technique. Results For a known displacement field imposed on both the synthetic grid image and the phantom image, CIV is accurate for 3-pixel and larger displacements on a 512 × 512 image with (C B ,S B )=(25,55) pixels. Further validation of our method is achieved by showing that our estimated landmark positions on patient images fall within the inter-observer variability in the ground truth. The effectiveness of our approach to analyse patient images is then established by calculating dense displacement fields throughout a cardiac cycle, and were found to be physiologically consistent. Circumferential strains were estimated at the apical, mid and basal slices of the heart, and were shown to compare favorably with those of HARP over the entire cardiac cycle, except in a few (∼4) of the segments in the 17-segment AHA model. The radial strains, however, are underestimated by our method in most segments when compared with HARP. Conclusions In summary, we have demonstrated the capability of CIV to accurately and efficiently quantify cardiac deformation from tMR images. Furthermore, physiologically consistent displacement fields and circumferential strain curves in most regions of the heart indicate that our approach, upon automating some pre-processing steps and testing in clinical trials, can potentially be implemented in a clinical setting. |
topic |
Tagged magnetic resonance imaging Correlation image velocimetry Cardiac deformation Cardiac strain |
url |
http://link.springer.com/article/10.1186/s12880-017-0195-7 |
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