Using DNA barcodes to identify forensically important species of Diptera in Espírito Santo State, Brazil

ABSTRACT Accurate insect specimen identification is usually a crucial first step in a forensic entomological analysis. It is traditionally done by morphological classification using identification keys. However, due to sensibility limitations in the identification of animal species based only on the...

Full description

Bibliographic Details
Main Authors: Pablo Viana Oliveira, Natan Silva Matos, Angélica Hollunder Klippel, Janyra Oliveira-Costa, Francisco de Paula Careta, Greiciane Gaburro Paneto
Format: Article
Language:English
Published: Instituto de Tecnologia do Paraná (Tecpar) 2017-05-01
Series:Brazilian Archives of Biology and Technology
Subjects:
COI
Online Access:http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132017000100403&lng=en&tlng=en
id doaj-fa3df580136b4f68892bee345ac7d378
record_format Article
spelling doaj-fa3df580136b4f68892bee345ac7d3782020-11-24T23:41:00ZengInstituto de Tecnologia do Paraná (Tecpar)Brazilian Archives of Biology and Technology1678-43242017-05-0160010.1590/1678-4324-2017160106S1516-89132017000100403Using DNA barcodes to identify forensically important species of Diptera in Espírito Santo State, BrazilPablo Viana OliveiraNatan Silva MatosAngélica Hollunder KlippelJanyra Oliveira-CostaFrancisco de Paula CaretaGreiciane Gaburro PanetoABSTRACT Accurate insect specimen identification is usually a crucial first step in a forensic entomological analysis. It is traditionally done by morphological classification using identification keys. However, due to sensibility limitations in the identification of animal species based only on their morphology, new methods have been developed, including species identification by DNA barcodes. The objective of this study was to identify forensically important species of Diptera in Espirito Santo state using DNA barcodes. For this, adult flies were collected in Espirito Santo, Southeast Region of Brazil. After DNA extraction, COI gene was amplified and sequenced. All sequences were matched to BOLD platform and alternatively to GenBank MegaBLAST. As result, 281 adult flies were collected and identified morphologically. From these, 36% of samples were classified as Calliphoridae, 34% of Muscidae and 30% of Sarcophagidae. Approximately 10% of all collected samples were analyzes by DNA. It was possible to identify only 35.7% of tested samples, probably due to lack of samples deposited in databases. Therefore, more efforts should be made to deposit a greater variety of dipterous in databases to allow the use of this technique in forensic routine, especially in BOLD.http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132017000100403&lng=en&tlng=enEntomologyCOIBOLDForensicFlies
collection DOAJ
language English
format Article
sources DOAJ
author Pablo Viana Oliveira
Natan Silva Matos
Angélica Hollunder Klippel
Janyra Oliveira-Costa
Francisco de Paula Careta
Greiciane Gaburro Paneto
spellingShingle Pablo Viana Oliveira
Natan Silva Matos
Angélica Hollunder Klippel
Janyra Oliveira-Costa
Francisco de Paula Careta
Greiciane Gaburro Paneto
Using DNA barcodes to identify forensically important species of Diptera in Espírito Santo State, Brazil
Brazilian Archives of Biology and Technology
Entomology
COI
BOLD
Forensic
Flies
author_facet Pablo Viana Oliveira
Natan Silva Matos
Angélica Hollunder Klippel
Janyra Oliveira-Costa
Francisco de Paula Careta
Greiciane Gaburro Paneto
author_sort Pablo Viana Oliveira
title Using DNA barcodes to identify forensically important species of Diptera in Espírito Santo State, Brazil
title_short Using DNA barcodes to identify forensically important species of Diptera in Espírito Santo State, Brazil
title_full Using DNA barcodes to identify forensically important species of Diptera in Espírito Santo State, Brazil
title_fullStr Using DNA barcodes to identify forensically important species of Diptera in Espírito Santo State, Brazil
title_full_unstemmed Using DNA barcodes to identify forensically important species of Diptera in Espírito Santo State, Brazil
title_sort using dna barcodes to identify forensically important species of diptera in espírito santo state, brazil
publisher Instituto de Tecnologia do Paraná (Tecpar)
series Brazilian Archives of Biology and Technology
issn 1678-4324
publishDate 2017-05-01
description ABSTRACT Accurate insect specimen identification is usually a crucial first step in a forensic entomological analysis. It is traditionally done by morphological classification using identification keys. However, due to sensibility limitations in the identification of animal species based only on their morphology, new methods have been developed, including species identification by DNA barcodes. The objective of this study was to identify forensically important species of Diptera in Espirito Santo state using DNA barcodes. For this, adult flies were collected in Espirito Santo, Southeast Region of Brazil. After DNA extraction, COI gene was amplified and sequenced. All sequences were matched to BOLD platform and alternatively to GenBank MegaBLAST. As result, 281 adult flies were collected and identified morphologically. From these, 36% of samples were classified as Calliphoridae, 34% of Muscidae and 30% of Sarcophagidae. Approximately 10% of all collected samples were analyzes by DNA. It was possible to identify only 35.7% of tested samples, probably due to lack of samples deposited in databases. Therefore, more efforts should be made to deposit a greater variety of dipterous in databases to allow the use of this technique in forensic routine, especially in BOLD.
topic Entomology
COI
BOLD
Forensic
Flies
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132017000100403&lng=en&tlng=en
work_keys_str_mv AT pablovianaoliveira usingdnabarcodestoidentifyforensicallyimportantspeciesofdipterainespiritosantostatebrazil
AT natansilvamatos usingdnabarcodestoidentifyforensicallyimportantspeciesofdipterainespiritosantostatebrazil
AT angelicahollunderklippel usingdnabarcodestoidentifyforensicallyimportantspeciesofdipterainespiritosantostatebrazil
AT janyraoliveiracosta usingdnabarcodestoidentifyforensicallyimportantspeciesofdipterainespiritosantostatebrazil
AT franciscodepaulacareta usingdnabarcodestoidentifyforensicallyimportantspeciesofdipterainespiritosantostatebrazil
AT greicianegaburropaneto usingdnabarcodestoidentifyforensicallyimportantspeciesofdipterainespiritosantostatebrazil
_version_ 1725508339138297856