The Crossroads of Precision Medicine and Therapeutic Decision-Making: Use of an Analytical Computational Platform to Predict Response to Cancer Treatments

Metastatic cancer is a medical challenge that has been historically resistant to treatments. One area of leverage in cancer care is the development of molecularly-driven combination therapies, offering the possibility to overcome resistance. The selection of optimized treatments based on the complex...

Full description

Bibliographic Details
Main Authors: Amélie Boichard, Stephane B. Richard, Razelle Kurzrock
Format: Article
Language:English
Published: MDPI AG 2020-01-01
Series:Cancers
Subjects:
Online Access:https://www.mdpi.com/2072-6694/12/1/166
id doaj-fa210afe12ae4ea68c52983602271658
record_format Article
spelling doaj-fa210afe12ae4ea68c529836022716582020-11-25T01:27:50ZengMDPI AGCancers2072-66942020-01-0112116610.3390/cancers12010166cancers12010166The Crossroads of Precision Medicine and Therapeutic Decision-Making: Use of an Analytical Computational Platform to Predict Response to Cancer TreatmentsAmélie Boichard0Stephane B. Richard1Razelle Kurzrock2Center for Personalized Cancer Therapy, University of California Moores Cancer Center, La Jolla, CA 92093, USACureMatch Inc., San Diego, CA 92121, USACenter for Personalized Cancer Therapy, University of California Moores Cancer Center, La Jolla, CA 92093, USAMetastatic cancer is a medical challenge that has been historically resistant to treatments. One area of leverage in cancer care is the development of molecularly-driven combination therapies, offering the possibility to overcome resistance. The selection of optimized treatments based on the complex molecular features of a patient&#8217;s tumor may be rendered easier by using a computer-assisted program. We used the PreciGENE<sup>&#174;</sup> platform that uses multi-pathway molecular analysis to identify personalized therapeutic options. These options are ranked using a predictive score reflecting the degree to which a therapy or combination of therapies matches the patient&#8217;s biomarker profile. We searched PubMed from February 2010 to June 2017 for all patients described as exceptional responders who also had molecular data available. Altogether, 70 patients with cancer who had received 202 different treatment lines and who had responded (stable disease &#8805;12 months/partial or complete remission) to &#8805;1 regimen were curated. We demonstrate that an algorithm reflecting the degree to which patients were matched to the drugs administered correctly ranked the response to the regimens with a sensitivity of 84% and a specificity of 77%. The difference in matching score between successful and unsuccessful treatment lines was significant (median, 65% versus 0%, <i>p</i>-value &lt;0.0001).https://www.mdpi.com/2072-6694/12/1/166precision medicineneoplasmsmolecular pathologyexceptional responderstherapeutic decision
collection DOAJ
language English
format Article
sources DOAJ
author Amélie Boichard
Stephane B. Richard
Razelle Kurzrock
spellingShingle Amélie Boichard
Stephane B. Richard
Razelle Kurzrock
The Crossroads of Precision Medicine and Therapeutic Decision-Making: Use of an Analytical Computational Platform to Predict Response to Cancer Treatments
Cancers
precision medicine
neoplasms
molecular pathology
exceptional responders
therapeutic decision
author_facet Amélie Boichard
Stephane B. Richard
Razelle Kurzrock
author_sort Amélie Boichard
title The Crossroads of Precision Medicine and Therapeutic Decision-Making: Use of an Analytical Computational Platform to Predict Response to Cancer Treatments
title_short The Crossroads of Precision Medicine and Therapeutic Decision-Making: Use of an Analytical Computational Platform to Predict Response to Cancer Treatments
title_full The Crossroads of Precision Medicine and Therapeutic Decision-Making: Use of an Analytical Computational Platform to Predict Response to Cancer Treatments
title_fullStr The Crossroads of Precision Medicine and Therapeutic Decision-Making: Use of an Analytical Computational Platform to Predict Response to Cancer Treatments
title_full_unstemmed The Crossroads of Precision Medicine and Therapeutic Decision-Making: Use of an Analytical Computational Platform to Predict Response to Cancer Treatments
title_sort crossroads of precision medicine and therapeutic decision-making: use of an analytical computational platform to predict response to cancer treatments
publisher MDPI AG
series Cancers
issn 2072-6694
publishDate 2020-01-01
description Metastatic cancer is a medical challenge that has been historically resistant to treatments. One area of leverage in cancer care is the development of molecularly-driven combination therapies, offering the possibility to overcome resistance. The selection of optimized treatments based on the complex molecular features of a patient&#8217;s tumor may be rendered easier by using a computer-assisted program. We used the PreciGENE<sup>&#174;</sup> platform that uses multi-pathway molecular analysis to identify personalized therapeutic options. These options are ranked using a predictive score reflecting the degree to which a therapy or combination of therapies matches the patient&#8217;s biomarker profile. We searched PubMed from February 2010 to June 2017 for all patients described as exceptional responders who also had molecular data available. Altogether, 70 patients with cancer who had received 202 different treatment lines and who had responded (stable disease &#8805;12 months/partial or complete remission) to &#8805;1 regimen were curated. We demonstrate that an algorithm reflecting the degree to which patients were matched to the drugs administered correctly ranked the response to the regimens with a sensitivity of 84% and a specificity of 77%. The difference in matching score between successful and unsuccessful treatment lines was significant (median, 65% versus 0%, <i>p</i>-value &lt;0.0001).
topic precision medicine
neoplasms
molecular pathology
exceptional responders
therapeutic decision
url https://www.mdpi.com/2072-6694/12/1/166
work_keys_str_mv AT amelieboichard thecrossroadsofprecisionmedicineandtherapeuticdecisionmakinguseofananalyticalcomputationalplatformtopredictresponsetocancertreatments
AT stephanebrichard thecrossroadsofprecisionmedicineandtherapeuticdecisionmakinguseofananalyticalcomputationalplatformtopredictresponsetocancertreatments
AT razellekurzrock thecrossroadsofprecisionmedicineandtherapeuticdecisionmakinguseofananalyticalcomputationalplatformtopredictresponsetocancertreatments
AT amelieboichard crossroadsofprecisionmedicineandtherapeuticdecisionmakinguseofananalyticalcomputationalplatformtopredictresponsetocancertreatments
AT stephanebrichard crossroadsofprecisionmedicineandtherapeuticdecisionmakinguseofananalyticalcomputationalplatformtopredictresponsetocancertreatments
AT razellekurzrock crossroadsofprecisionmedicineandtherapeuticdecisionmakinguseofananalyticalcomputationalplatformtopredictresponsetocancertreatments
_version_ 1725102867774177280