Identification of an operon involved in fluoride resistance in Enterobacter cloacae FRM

Abstract Fluorine is ubiquitous and the most active non-metal element in nature. While many microorganisms have developed fluoride resistance as a result of the widespread and prolonged application of oral hygiene products, the mechanisms used by these organisms to overcome fluoride toxicity are inc...

Full description

Bibliographic Details
Main Authors: Xiaoqing Liu, Jian Tian, Lihui Liu, Tao Zhu, Xiaoxia Yu, Xiaoyu Chu, Bin Yao, Ningfeng Wu, Yunliu Fan
Format: Article
Language:English
Published: Nature Publishing Group 2017-07-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-017-06988-1
id doaj-f9d87b22469d4124b11c9b103951dc36
record_format Article
spelling doaj-f9d87b22469d4124b11c9b103951dc362020-12-08T03:16:53ZengNature Publishing GroupScientific Reports2045-23222017-07-01711910.1038/s41598-017-06988-1Identification of an operon involved in fluoride resistance in Enterobacter cloacae FRMXiaoqing Liu0Jian Tian1Lihui Liu2Tao Zhu3Xiaoxia Yu4Xiaoyu Chu5Bin Yao6Ningfeng Wu7Yunliu Fan8Biotechnology Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesKey Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesAbstract Fluorine is ubiquitous and the most active non-metal element in nature. While many microorganisms have developed fluoride resistance as a result of the widespread and prolonged application of oral hygiene products, the mechanisms used by these organisms to overcome fluoride toxicity are incompletely understood. In this study, a fluoride-resistant strain, Enterobacter cloacae FRM, was identified which could grow well at a fluoride concentration of 4,000 mg/L. According to comparative genomics, transcriptome under fluoride stress, and sequence analyses of two fluoride-resistant fosmid clones, the genomic island GI3 was found to be important for fluoride resistance. The result of quantitative RT-PCR indicated that six genes on GI3, ppaC, uspA, eno, gpmA, crcB, and orf5249, which encode a fluoride transporter, fluoride-inhibited enzymes, and a universal stress protein, reside in an operon and are transcribed into two mRNAs activated by fluoride with a fluoride riboswitch. The results of knockout and complementation experiments indicated that these genes work together to provide high fluoride resistance to E. cloacae FRM. This study clarified the resistance mechanism of this high fluoride-resistant organism and has expanded our understanding of the biological effects of fluoride.https://doi.org/10.1038/s41598-017-06988-1
collection DOAJ
language English
format Article
sources DOAJ
author Xiaoqing Liu
Jian Tian
Lihui Liu
Tao Zhu
Xiaoxia Yu
Xiaoyu Chu
Bin Yao
Ningfeng Wu
Yunliu Fan
spellingShingle Xiaoqing Liu
Jian Tian
Lihui Liu
Tao Zhu
Xiaoxia Yu
Xiaoyu Chu
Bin Yao
Ningfeng Wu
Yunliu Fan
Identification of an operon involved in fluoride resistance in Enterobacter cloacae FRM
Scientific Reports
author_facet Xiaoqing Liu
Jian Tian
Lihui Liu
Tao Zhu
Xiaoxia Yu
Xiaoyu Chu
Bin Yao
Ningfeng Wu
Yunliu Fan
author_sort Xiaoqing Liu
title Identification of an operon involved in fluoride resistance in Enterobacter cloacae FRM
title_short Identification of an operon involved in fluoride resistance in Enterobacter cloacae FRM
title_full Identification of an operon involved in fluoride resistance in Enterobacter cloacae FRM
title_fullStr Identification of an operon involved in fluoride resistance in Enterobacter cloacae FRM
title_full_unstemmed Identification of an operon involved in fluoride resistance in Enterobacter cloacae FRM
title_sort identification of an operon involved in fluoride resistance in enterobacter cloacae frm
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2017-07-01
description Abstract Fluorine is ubiquitous and the most active non-metal element in nature. While many microorganisms have developed fluoride resistance as a result of the widespread and prolonged application of oral hygiene products, the mechanisms used by these organisms to overcome fluoride toxicity are incompletely understood. In this study, a fluoride-resistant strain, Enterobacter cloacae FRM, was identified which could grow well at a fluoride concentration of 4,000 mg/L. According to comparative genomics, transcriptome under fluoride stress, and sequence analyses of two fluoride-resistant fosmid clones, the genomic island GI3 was found to be important for fluoride resistance. The result of quantitative RT-PCR indicated that six genes on GI3, ppaC, uspA, eno, gpmA, crcB, and orf5249, which encode a fluoride transporter, fluoride-inhibited enzymes, and a universal stress protein, reside in an operon and are transcribed into two mRNAs activated by fluoride with a fluoride riboswitch. The results of knockout and complementation experiments indicated that these genes work together to provide high fluoride resistance to E. cloacae FRM. This study clarified the resistance mechanism of this high fluoride-resistant organism and has expanded our understanding of the biological effects of fluoride.
url https://doi.org/10.1038/s41598-017-06988-1
work_keys_str_mv AT xiaoqingliu identificationofanoperoninvolvedinfluorideresistanceinenterobactercloacaefrm
AT jiantian identificationofanoperoninvolvedinfluorideresistanceinenterobactercloacaefrm
AT lihuiliu identificationofanoperoninvolvedinfluorideresistanceinenterobactercloacaefrm
AT taozhu identificationofanoperoninvolvedinfluorideresistanceinenterobactercloacaefrm
AT xiaoxiayu identificationofanoperoninvolvedinfluorideresistanceinenterobactercloacaefrm
AT xiaoyuchu identificationofanoperoninvolvedinfluorideresistanceinenterobactercloacaefrm
AT binyao identificationofanoperoninvolvedinfluorideresistanceinenterobactercloacaefrm
AT ningfengwu identificationofanoperoninvolvedinfluorideresistanceinenterobactercloacaefrm
AT yunliufan identificationofanoperoninvolvedinfluorideresistanceinenterobactercloacaefrm
_version_ 1724392757726806016