Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose

The electronic nose (eNose) is an instrument designed to mimic the human olfactory system. Usage of eNose in medical applications is more popular than ever, due to its low costs and non-invasive nature. The eNose sniffs the gases and vapours that emanate from human waste (urine, breath, and stool) f...

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Main Authors: Siavash Esfahani, Alfian Wicaksono, Ella Mozdiak, Ramesh P. Arasaradnam, James A. Covington
Format: Article
Language:English
Published: MDPI AG 2018-12-01
Series:Biosensors
Subjects:
Online Access:https://www.mdpi.com/2079-6374/8/4/121
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spelling doaj-f9d65f3d183c44358678ca0e83316ac02020-11-25T00:58:12ZengMDPI AGBiosensors2079-63742018-12-018412110.3390/bios8040121bios8040121Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic NoseSiavash Esfahani0Alfian Wicaksono1Ella Mozdiak2Ramesh P. Arasaradnam3James A. Covington4School of Engineering, University of Warwick, Coventry CV4 7AL, UKSchool of Engineering, University of Warwick, Coventry CV4 7AL, UKDepartment of Gastroenterology, University Hospital Coventry and Warwickshire, Coventry, CV2 2DX, UKDepartment of Gastroenterology, University Hospital Coventry and Warwickshire, Coventry, CV2 2DX, UKSchool of Engineering, University of Warwick, Coventry CV4 7AL, UKThe electronic nose (eNose) is an instrument designed to mimic the human olfactory system. Usage of eNose in medical applications is more popular than ever, due to its low costs and non-invasive nature. The eNose sniffs the gases and vapours that emanate from human waste (urine, breath, and stool) for the diagnosis of variety of diseases. Diabetes mellitus type 2 (DM2) affects 8.3% of adults in the world, with 43% being underdiagnosed, resulting in 4.9 million deaths per year. In this study, we investigated the potential of urinary volatile organic compounds (VOCs) as novel non-invasive diagnostic biomarker for diabetes. In addition, we investigated the influence of sample age on the diagnostic accuracy of urinary VOCs. We analysed 140 urine samples (73 DM2, 67 healthy) with Field-Asymmetric Ion Mobility Spectrometry (FAIMS); a type of eNose; and FOX 4000 (AlphaM.O.S, Toulouse, France). Urine samples were collected at UHCW NHS Trust clinics over 4 years and stored at −80 °C within two hours of collection. Four different classifiers were used for classification, specifically Sparse Logistic Regression, Random Forest, Gaussian Process, and Support Vector on both FAIMS and FOX4000. Both eNoses showed their capability of diagnosing DM2 from controls and the effect of sample age on the discrimination. FAIMS samples were analysed for all samples aged 0⁻4 years (AUC: 88%, sensitivity: 87%, specificity: 82%) and then sub group samples aged less than a year (AUC (Area Under the Curve): 94%, Sensitivity: 92%, specificity: 100%). FOX4000 samples were analysed for all samples aged 0⁻4 years (AUC: 85%, sensitivity: 77%, specificity: 85%) and a sub group samples aged less than 18 months: (AUC: 94%, sensitivity: 90%, specificity: 89%). We demonstrated that FAIMS and FOX 4000 eNoses can discriminate DM2 from controls using urinary VOCs. In addition, we showed that urine sample age affects discriminative accuracy.https://www.mdpi.com/2079-6374/8/4/121electronic nosebiosensordiabetesFOX 4000FAIMSurine samplenon-invasive diagnosismedical applicationvolatile organic compounds (VOCs)
collection DOAJ
language English
format Article
sources DOAJ
author Siavash Esfahani
Alfian Wicaksono
Ella Mozdiak
Ramesh P. Arasaradnam
James A. Covington
spellingShingle Siavash Esfahani
Alfian Wicaksono
Ella Mozdiak
Ramesh P. Arasaradnam
James A. Covington
Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose
Biosensors
electronic nose
biosensor
diabetes
FOX 4000
FAIMS
urine sample
non-invasive diagnosis
medical application
volatile organic compounds (VOCs)
author_facet Siavash Esfahani
Alfian Wicaksono
Ella Mozdiak
Ramesh P. Arasaradnam
James A. Covington
author_sort Siavash Esfahani
title Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose
title_short Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose
title_full Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose
title_fullStr Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose
title_full_unstemmed Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose
title_sort non-invasive diagnosis of diabetes by volatile organic compounds in urine using faims and fox4000 electronic nose
publisher MDPI AG
series Biosensors
issn 2079-6374
publishDate 2018-12-01
description The electronic nose (eNose) is an instrument designed to mimic the human olfactory system. Usage of eNose in medical applications is more popular than ever, due to its low costs and non-invasive nature. The eNose sniffs the gases and vapours that emanate from human waste (urine, breath, and stool) for the diagnosis of variety of diseases. Diabetes mellitus type 2 (DM2) affects 8.3% of adults in the world, with 43% being underdiagnosed, resulting in 4.9 million deaths per year. In this study, we investigated the potential of urinary volatile organic compounds (VOCs) as novel non-invasive diagnostic biomarker for diabetes. In addition, we investigated the influence of sample age on the diagnostic accuracy of urinary VOCs. We analysed 140 urine samples (73 DM2, 67 healthy) with Field-Asymmetric Ion Mobility Spectrometry (FAIMS); a type of eNose; and FOX 4000 (AlphaM.O.S, Toulouse, France). Urine samples were collected at UHCW NHS Trust clinics over 4 years and stored at −80 °C within two hours of collection. Four different classifiers were used for classification, specifically Sparse Logistic Regression, Random Forest, Gaussian Process, and Support Vector on both FAIMS and FOX4000. Both eNoses showed their capability of diagnosing DM2 from controls and the effect of sample age on the discrimination. FAIMS samples were analysed for all samples aged 0⁻4 years (AUC: 88%, sensitivity: 87%, specificity: 82%) and then sub group samples aged less than a year (AUC (Area Under the Curve): 94%, Sensitivity: 92%, specificity: 100%). FOX4000 samples were analysed for all samples aged 0⁻4 years (AUC: 85%, sensitivity: 77%, specificity: 85%) and a sub group samples aged less than 18 months: (AUC: 94%, sensitivity: 90%, specificity: 89%). We demonstrated that FAIMS and FOX 4000 eNoses can discriminate DM2 from controls using urinary VOCs. In addition, we showed that urine sample age affects discriminative accuracy.
topic electronic nose
biosensor
diabetes
FOX 4000
FAIMS
urine sample
non-invasive diagnosis
medical application
volatile organic compounds (VOCs)
url https://www.mdpi.com/2079-6374/8/4/121
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