Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose
The electronic nose (eNose) is an instrument designed to mimic the human olfactory system. Usage of eNose in medical applications is more popular than ever, due to its low costs and non-invasive nature. The eNose sniffs the gases and vapours that emanate from human waste (urine, breath, and stool) f...
Main Authors: | , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
MDPI AG
2018-12-01
|
Series: | Biosensors |
Subjects: | |
Online Access: | https://www.mdpi.com/2079-6374/8/4/121 |
id |
doaj-f9d65f3d183c44358678ca0e83316ac0 |
---|---|
record_format |
Article |
spelling |
doaj-f9d65f3d183c44358678ca0e83316ac02020-11-25T00:58:12ZengMDPI AGBiosensors2079-63742018-12-018412110.3390/bios8040121bios8040121Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic NoseSiavash Esfahani0Alfian Wicaksono1Ella Mozdiak2Ramesh P. Arasaradnam3James A. Covington4School of Engineering, University of Warwick, Coventry CV4 7AL, UKSchool of Engineering, University of Warwick, Coventry CV4 7AL, UKDepartment of Gastroenterology, University Hospital Coventry and Warwickshire, Coventry, CV2 2DX, UKDepartment of Gastroenterology, University Hospital Coventry and Warwickshire, Coventry, CV2 2DX, UKSchool of Engineering, University of Warwick, Coventry CV4 7AL, UKThe electronic nose (eNose) is an instrument designed to mimic the human olfactory system. Usage of eNose in medical applications is more popular than ever, due to its low costs and non-invasive nature. The eNose sniffs the gases and vapours that emanate from human waste (urine, breath, and stool) for the diagnosis of variety of diseases. Diabetes mellitus type 2 (DM2) affects 8.3% of adults in the world, with 43% being underdiagnosed, resulting in 4.9 million deaths per year. In this study, we investigated the potential of urinary volatile organic compounds (VOCs) as novel non-invasive diagnostic biomarker for diabetes. In addition, we investigated the influence of sample age on the diagnostic accuracy of urinary VOCs. We analysed 140 urine samples (73 DM2, 67 healthy) with Field-Asymmetric Ion Mobility Spectrometry (FAIMS); a type of eNose; and FOX 4000 (AlphaM.O.S, Toulouse, France). Urine samples were collected at UHCW NHS Trust clinics over 4 years and stored at −80 °C within two hours of collection. Four different classifiers were used for classification, specifically Sparse Logistic Regression, Random Forest, Gaussian Process, and Support Vector on both FAIMS and FOX4000. Both eNoses showed their capability of diagnosing DM2 from controls and the effect of sample age on the discrimination. FAIMS samples were analysed for all samples aged 0⁻4 years (AUC: 88%, sensitivity: 87%, specificity: 82%) and then sub group samples aged less than a year (AUC (Area Under the Curve): 94%, Sensitivity: 92%, specificity: 100%). FOX4000 samples were analysed for all samples aged 0⁻4 years (AUC: 85%, sensitivity: 77%, specificity: 85%) and a sub group samples aged less than 18 months: (AUC: 94%, sensitivity: 90%, specificity: 89%). We demonstrated that FAIMS and FOX 4000 eNoses can discriminate DM2 from controls using urinary VOCs. In addition, we showed that urine sample age affects discriminative accuracy.https://www.mdpi.com/2079-6374/8/4/121electronic nosebiosensordiabetesFOX 4000FAIMSurine samplenon-invasive diagnosismedical applicationvolatile organic compounds (VOCs) |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Siavash Esfahani Alfian Wicaksono Ella Mozdiak Ramesh P. Arasaradnam James A. Covington |
spellingShingle |
Siavash Esfahani Alfian Wicaksono Ella Mozdiak Ramesh P. Arasaradnam James A. Covington Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose Biosensors electronic nose biosensor diabetes FOX 4000 FAIMS urine sample non-invasive diagnosis medical application volatile organic compounds (VOCs) |
author_facet |
Siavash Esfahani Alfian Wicaksono Ella Mozdiak Ramesh P. Arasaradnam James A. Covington |
author_sort |
Siavash Esfahani |
title |
Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose |
title_short |
Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose |
title_full |
Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose |
title_fullStr |
Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose |
title_full_unstemmed |
Non-Invasive Diagnosis of Diabetes by Volatile Organic Compounds in Urine Using FAIMS and Fox4000 Electronic Nose |
title_sort |
non-invasive diagnosis of diabetes by volatile organic compounds in urine using faims and fox4000 electronic nose |
publisher |
MDPI AG |
series |
Biosensors |
issn |
2079-6374 |
publishDate |
2018-12-01 |
description |
The electronic nose (eNose) is an instrument designed to mimic the human olfactory system. Usage of eNose in medical applications is more popular than ever, due to its low costs and non-invasive nature. The eNose sniffs the gases and vapours that emanate from human waste (urine, breath, and stool) for the diagnosis of variety of diseases. Diabetes mellitus type 2 (DM2) affects 8.3% of adults in the world, with 43% being underdiagnosed, resulting in 4.9 million deaths per year. In this study, we investigated the potential of urinary volatile organic compounds (VOCs) as novel non-invasive diagnostic biomarker for diabetes. In addition, we investigated the influence of sample age on the diagnostic accuracy of urinary VOCs. We analysed 140 urine samples (73 DM2, 67 healthy) with Field-Asymmetric Ion Mobility Spectrometry (FAIMS); a type of eNose; and FOX 4000 (AlphaM.O.S, Toulouse, France). Urine samples were collected at UHCW NHS Trust clinics over 4 years and stored at −80 °C within two hours of collection. Four different classifiers were used for classification, specifically Sparse Logistic Regression, Random Forest, Gaussian Process, and Support Vector on both FAIMS and FOX4000. Both eNoses showed their capability of diagnosing DM2 from controls and the effect of sample age on the discrimination. FAIMS samples were analysed for all samples aged 0⁻4 years (AUC: 88%, sensitivity: 87%, specificity: 82%) and then sub group samples aged less than a year (AUC (Area Under the Curve): 94%, Sensitivity: 92%, specificity: 100%). FOX4000 samples were analysed for all samples aged 0⁻4 years (AUC: 85%, sensitivity: 77%, specificity: 85%) and a sub group samples aged less than 18 months: (AUC: 94%, sensitivity: 90%, specificity: 89%). We demonstrated that FAIMS and FOX 4000 eNoses can discriminate DM2 from controls using urinary VOCs. In addition, we showed that urine sample age affects discriminative accuracy. |
topic |
electronic nose biosensor diabetes FOX 4000 FAIMS urine sample non-invasive diagnosis medical application volatile organic compounds (VOCs) |
url |
https://www.mdpi.com/2079-6374/8/4/121 |
work_keys_str_mv |
AT siavashesfahani noninvasivediagnosisofdiabetesbyvolatileorganiccompoundsinurineusingfaimsandfox4000electronicnose AT alfianwicaksono noninvasivediagnosisofdiabetesbyvolatileorganiccompoundsinurineusingfaimsandfox4000electronicnose AT ellamozdiak noninvasivediagnosisofdiabetesbyvolatileorganiccompoundsinurineusingfaimsandfox4000electronicnose AT rameshparasaradnam noninvasivediagnosisofdiabetesbyvolatileorganiccompoundsinurineusingfaimsandfox4000electronicnose AT jamesacovington noninvasivediagnosisofdiabetesbyvolatileorganiccompoundsinurineusingfaimsandfox4000electronicnose |
_version_ |
1725221146059603968 |