Ensemble of DNA Kinks
The DNA open states, which are locally unwound regions of the double helix within which hydrogen bonds between complementary nitrous bases are broken, are often modeled as quasiparticles – DNA kinks. Most of the works on the DNA kinks are devoted to the studies of their dynamic properties, as well a...
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EDP Sciences
2019-01-01
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doaj-f7e58e4cd9524658b53899702f5876202021-08-02T07:33:30ZengEDP SciencesEPJ Web of Conferences2100-014X2019-01-012240300510.1051/epjconf/201922403005epjconf_mnps2018_03005Ensemble of DNA KinksYakushevich Ludmila V.0Krasnobaeva Larisa A.Institute of Cell Biophysics of the Russian Academy of SciencesThe DNA open states, which are locally unwound regions of the double helix within which hydrogen bonds between complementary nitrous bases are broken, are often modeled as quasiparticles – DNA kinks. Most of the works on the DNA kinks are devoted to the studies of their dynamic properties, as well as their role in the functioning of the molecule. However, if not one but N open states are formed in the DNA molecule it is reasonable to consider the problem of the statistics of the ensemble of N DNA kinks. The statistical properties of such an ensemble are still poorly understood. In the present work, we study these properties applying new data on the dynamic characteristics of DNA kinks.https://www.epj-conferences.org/articles/epjconf/pdf/2019/29/epjconf_mnps2018_03005.pdf |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Yakushevich Ludmila V. Krasnobaeva Larisa A. |
spellingShingle |
Yakushevich Ludmila V. Krasnobaeva Larisa A. Ensemble of DNA Kinks EPJ Web of Conferences |
author_facet |
Yakushevich Ludmila V. Krasnobaeva Larisa A. |
author_sort |
Yakushevich Ludmila V. |
title |
Ensemble of DNA Kinks |
title_short |
Ensemble of DNA Kinks |
title_full |
Ensemble of DNA Kinks |
title_fullStr |
Ensemble of DNA Kinks |
title_full_unstemmed |
Ensemble of DNA Kinks |
title_sort |
ensemble of dna kinks |
publisher |
EDP Sciences |
series |
EPJ Web of Conferences |
issn |
2100-014X |
publishDate |
2019-01-01 |
description |
The DNA open states, which are locally unwound regions of the double helix within which hydrogen bonds between complementary nitrous bases are broken, are often modeled as quasiparticles – DNA kinks. Most of the works on the DNA kinks are devoted to the studies of their dynamic properties, as well as their role in the functioning of the molecule. However, if not one but N open states are formed in the DNA molecule it is reasonable to consider the problem of the statistics of the ensemble of N DNA kinks. The statistical properties of such an ensemble are still poorly understood. In the present work, we study these properties applying new data on the dynamic characteristics of DNA kinks. |
url |
https://www.epj-conferences.org/articles/epjconf/pdf/2019/29/epjconf_mnps2018_03005.pdf |
work_keys_str_mv |
AT yakushevichludmilav ensembleofdnakinks AT krasnobaevalarisaa ensembleofdnakinks |
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1721239308276334592 |