Morphological and Molecular Characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001 (Dorylaimida: Nordiidae) from California, with the First Molecular Study and an Updated Taxonomy of the Genus

This paper deals with the morphological and molecular characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001, with an integrative approach. The finding of <i>K. faroidai</i> in California is a remarkable biogeographical novelty, as it is the first American record...

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Main Author: Sergio Álvarez-Ortega
Format: Article
Language:English
Published: MDPI AG 2020-12-01
Series:Animals
Subjects:
key
SEM
Online Access:https://www.mdpi.com/2076-2615/10/12/2300
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spelling doaj-f5edadc5f64d44edaabd7c8be4943a9e2020-12-05T00:03:39ZengMDPI AGAnimals2076-26152020-12-01102300230010.3390/ani10122300Morphological and Molecular Characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001 (Dorylaimida: Nordiidae) from California, with the First Molecular Study and an Updated Taxonomy of the GenusSergio Álvarez-Ortega0Departamento de Biología y Geología, Física y Química Inorgánica, Universidad Rey Juan Carlos, Campus de Móstoles, 28933 Madrid, SpainThis paper deals with the morphological and molecular characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001, with an integrative approach. The finding of <i>K. faroidai</i> in California is a remarkable biogeographical novelty, as it is the first American record of the species. Molecular data herein obtained represent the first molecular study of the genus <i>Kochinema</i>. Furthermore, scanning electron microscopy (SEM) observations of a member of <i>Kochinema</i> are provided for the first time. Additionally, this contribution provides new insights into the phylogeny and taxonomy of the nematode genus <i>Kochinema</i>. A brief historical outline of the matter is presented. Then, the morphological pattern of the genus is revised and illustrated, the anterior position of amphids, whose opening is located on lateral lip, being its most relevant diagnostic feature. The phylogenetic analysis inferred from D2–D3 expansion segments of 28S rRNA gene shows that <i>Kochinema</i> clustered together with other dorylaimid species characterized by the absence of <i>pars refringens vaginae</i> and that it does not share a recent common ancestor with other members of the family Nordiidae. A likely polyphyly of the family Nordiidae is confirmed. Finally, an updated taxonomy of the genus is proposed, including a revised diagnosis, a list of species, a key to species identification, and a compendium of their main morphometrics and distribution data.https://www.mdpi.com/2076-2615/10/12/230028S rRNAcompendiumdiagnosiskeySEM<i>species incertae sedis</i>
collection DOAJ
language English
format Article
sources DOAJ
author Sergio Álvarez-Ortega
spellingShingle Sergio Álvarez-Ortega
Morphological and Molecular Characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001 (Dorylaimida: Nordiidae) from California, with the First Molecular Study and an Updated Taxonomy of the Genus
Animals
28S rRNA
compendium
diagnosis
key
SEM
<i>species incertae sedis</i>
author_facet Sergio Álvarez-Ortega
author_sort Sergio Álvarez-Ortega
title Morphological and Molecular Characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001 (Dorylaimida: Nordiidae) from California, with the First Molecular Study and an Updated Taxonomy of the Genus
title_short Morphological and Molecular Characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001 (Dorylaimida: Nordiidae) from California, with the First Molecular Study and an Updated Taxonomy of the Genus
title_full Morphological and Molecular Characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001 (Dorylaimida: Nordiidae) from California, with the First Molecular Study and an Updated Taxonomy of the Genus
title_fullStr Morphological and Molecular Characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001 (Dorylaimida: Nordiidae) from California, with the First Molecular Study and an Updated Taxonomy of the Genus
title_full_unstemmed Morphological and Molecular Characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001 (Dorylaimida: Nordiidae) from California, with the First Molecular Study and an Updated Taxonomy of the Genus
title_sort morphological and molecular characterization of <i>kochinema farodai</i> baqri and bohra, 2001 (dorylaimida: nordiidae) from california, with the first molecular study and an updated taxonomy of the genus
publisher MDPI AG
series Animals
issn 2076-2615
publishDate 2020-12-01
description This paper deals with the morphological and molecular characterization of <i>Kochinema farodai</i> Baqri and Bohra, 2001, with an integrative approach. The finding of <i>K. faroidai</i> in California is a remarkable biogeographical novelty, as it is the first American record of the species. Molecular data herein obtained represent the first molecular study of the genus <i>Kochinema</i>. Furthermore, scanning electron microscopy (SEM) observations of a member of <i>Kochinema</i> are provided for the first time. Additionally, this contribution provides new insights into the phylogeny and taxonomy of the nematode genus <i>Kochinema</i>. A brief historical outline of the matter is presented. Then, the morphological pattern of the genus is revised and illustrated, the anterior position of amphids, whose opening is located on lateral lip, being its most relevant diagnostic feature. The phylogenetic analysis inferred from D2–D3 expansion segments of 28S rRNA gene shows that <i>Kochinema</i> clustered together with other dorylaimid species characterized by the absence of <i>pars refringens vaginae</i> and that it does not share a recent common ancestor with other members of the family Nordiidae. A likely polyphyly of the family Nordiidae is confirmed. Finally, an updated taxonomy of the genus is proposed, including a revised diagnosis, a list of species, a key to species identification, and a compendium of their main morphometrics and distribution data.
topic 28S rRNA
compendium
diagnosis
key
SEM
<i>species incertae sedis</i>
url https://www.mdpi.com/2076-2615/10/12/2300
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