A Segmentation Method for Lung Parenchyma Image Sequences Based on Superpixels and a Self-Generating Neural Forest.

Lung parenchyma segmentation is often performed as an important pre-processing step in the computer-aided diagnosis of lung nodules based on CT image sequences. However, existing lung parenchyma image segmentation methods cannot fully segment all lung parenchyma images and have a slow processing spe...

Full description

Bibliographic Details
Main Authors: Xiaolei Liao, Juanjuan Zhao, Cheng Jiao, Lei Lei, Yan Qiang, Qiang Cui
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2016-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC4988714?pdf=render
id doaj-f5766129079644ab982a89ec7504bee5
record_format Article
spelling doaj-f5766129079644ab982a89ec7504bee52020-11-25T00:07:59ZengPublic Library of Science (PLoS)PLoS ONE1932-62032016-01-01118e016055610.1371/journal.pone.0160556A Segmentation Method for Lung Parenchyma Image Sequences Based on Superpixels and a Self-Generating Neural Forest.Xiaolei LiaoJuanjuan ZhaoCheng JiaoLei LeiYan QiangQiang CuiLung parenchyma segmentation is often performed as an important pre-processing step in the computer-aided diagnosis of lung nodules based on CT image sequences. However, existing lung parenchyma image segmentation methods cannot fully segment all lung parenchyma images and have a slow processing speed, particularly for images in the top and bottom of the lung and the images that contain lung nodules.Our proposed method first uses the position of the lung parenchyma image features to obtain lung parenchyma ROI image sequences. A gradient and sequential linear iterative clustering algorithm (GSLIC) for sequence image segmentation is then proposed to segment the ROI image sequences and obtain superpixel samples. The SGNF, which is optimized by a genetic algorithm (GA), is then utilized for superpixel clustering. Finally, the grey and geometric features of the superpixel samples are used to identify and segment all of the lung parenchyma image sequences.Our proposed method achieves higher segmentation precision and greater accuracy in less time. It has an average processing time of 42.21 seconds for each dataset and an average volume pixel overlap ratio of 92.22 ± 4.02% for four types of lung parenchyma image sequences.http://europepmc.org/articles/PMC4988714?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Xiaolei Liao
Juanjuan Zhao
Cheng Jiao
Lei Lei
Yan Qiang
Qiang Cui
spellingShingle Xiaolei Liao
Juanjuan Zhao
Cheng Jiao
Lei Lei
Yan Qiang
Qiang Cui
A Segmentation Method for Lung Parenchyma Image Sequences Based on Superpixels and a Self-Generating Neural Forest.
PLoS ONE
author_facet Xiaolei Liao
Juanjuan Zhao
Cheng Jiao
Lei Lei
Yan Qiang
Qiang Cui
author_sort Xiaolei Liao
title A Segmentation Method for Lung Parenchyma Image Sequences Based on Superpixels and a Self-Generating Neural Forest.
title_short A Segmentation Method for Lung Parenchyma Image Sequences Based on Superpixels and a Self-Generating Neural Forest.
title_full A Segmentation Method for Lung Parenchyma Image Sequences Based on Superpixels and a Self-Generating Neural Forest.
title_fullStr A Segmentation Method for Lung Parenchyma Image Sequences Based on Superpixels and a Self-Generating Neural Forest.
title_full_unstemmed A Segmentation Method for Lung Parenchyma Image Sequences Based on Superpixels and a Self-Generating Neural Forest.
title_sort segmentation method for lung parenchyma image sequences based on superpixels and a self-generating neural forest.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2016-01-01
description Lung parenchyma segmentation is often performed as an important pre-processing step in the computer-aided diagnosis of lung nodules based on CT image sequences. However, existing lung parenchyma image segmentation methods cannot fully segment all lung parenchyma images and have a slow processing speed, particularly for images in the top and bottom of the lung and the images that contain lung nodules.Our proposed method first uses the position of the lung parenchyma image features to obtain lung parenchyma ROI image sequences. A gradient and sequential linear iterative clustering algorithm (GSLIC) for sequence image segmentation is then proposed to segment the ROI image sequences and obtain superpixel samples. The SGNF, which is optimized by a genetic algorithm (GA), is then utilized for superpixel clustering. Finally, the grey and geometric features of the superpixel samples are used to identify and segment all of the lung parenchyma image sequences.Our proposed method achieves higher segmentation precision and greater accuracy in less time. It has an average processing time of 42.21 seconds for each dataset and an average volume pixel overlap ratio of 92.22 ± 4.02% for four types of lung parenchyma image sequences.
url http://europepmc.org/articles/PMC4988714?pdf=render
work_keys_str_mv AT xiaoleiliao asegmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT juanjuanzhao asegmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT chengjiao asegmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT leilei asegmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT yanqiang asegmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT qiangcui asegmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT xiaoleiliao segmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT juanjuanzhao segmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT chengjiao segmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT leilei segmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT yanqiang segmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
AT qiangcui segmentationmethodforlungparenchymaimagesequencesbasedonsuperpixelsandaselfgeneratingneuralforest
_version_ 1725417266983469056