Voxel-based clustered imaging by multiparameter diffusion tensor images for glioma grading

Gliomas are the most common intra-axial primary brain tumour; therefore, predicting glioma grade would influence therapeutic strategies. Although several methods based on single or multiple parameters from diagnostic images exist, a definitive method for pre-operatively determining glioma grade rem...

Full description

Bibliographic Details
Main Authors: Rika Inano, Naoya Oishi, Takeharu Kunieda, Yoshiki Arakawa, Yukihiro Yamao, Sumiya Shibata, Takayuki Kikuchi, Hidenao Fukuyama, Susumu Miyamoto
Format: Article
Language:English
Published: Elsevier 2014-01-01
Series:NeuroImage: Clinical
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2213158214001107
id doaj-f54b64e2efa1470c8f9d1857e6512fb3
record_format Article
collection DOAJ
language English
format Article
sources DOAJ
author Rika Inano
Naoya Oishi
Takeharu Kunieda
Yoshiki Arakawa
Yukihiro Yamao
Sumiya Shibata
Takayuki Kikuchi
Hidenao Fukuyama
Susumu Miyamoto
spellingShingle Rika Inano
Naoya Oishi
Takeharu Kunieda
Yoshiki Arakawa
Yukihiro Yamao
Sumiya Shibata
Takayuki Kikuchi
Hidenao Fukuyama
Susumu Miyamoto
Voxel-based clustered imaging by multiparameter diffusion tensor images for glioma grading
NeuroImage: Clinical
Glioma grading
Diffusion tensor imaging
Voxel-based clustering
Self-organizing map
K-means
Support vector machine
author_facet Rika Inano
Naoya Oishi
Takeharu Kunieda
Yoshiki Arakawa
Yukihiro Yamao
Sumiya Shibata
Takayuki Kikuchi
Hidenao Fukuyama
Susumu Miyamoto
author_sort Rika Inano
title Voxel-based clustered imaging by multiparameter diffusion tensor images for glioma grading
title_short Voxel-based clustered imaging by multiparameter diffusion tensor images for glioma grading
title_full Voxel-based clustered imaging by multiparameter diffusion tensor images for glioma grading
title_fullStr Voxel-based clustered imaging by multiparameter diffusion tensor images for glioma grading
title_full_unstemmed Voxel-based clustered imaging by multiparameter diffusion tensor images for glioma grading
title_sort voxel-based clustered imaging by multiparameter diffusion tensor images for glioma grading
publisher Elsevier
series NeuroImage: Clinical
issn 2213-1582
publishDate 2014-01-01
description Gliomas are the most common intra-axial primary brain tumour; therefore, predicting glioma grade would influence therapeutic strategies. Although several methods based on single or multiple parameters from diagnostic images exist, a definitive method for pre-operatively determining glioma grade remains unknown. We aimed to develop an unsupervised method using multiple parameters from pre-operative diffusion tensor images for obtaining a clustered image that could enable visual grading of gliomas. Fourteen patients with low-grade gliomas and 19 with high-grade gliomas underwent diffusion tensor imaging and three-dimensional T1-weighted magnetic resonance imaging before tumour resection. Seven features including diffusion-weighted imaging, fractional anisotropy, first eigenvalue, second eigenvalue, third eigenvalue, mean diffusivity and raw T2 signal with no diffusion weighting, were extracted as multiple parameters from diffusion tensor imaging. We developed a two-level clustering approach for a self-organizing map followed by the K-means algorithm to enable unsupervised clustering of a large number of input vectors with the seven features for the whole brain. The vectors were grouped by the self-organizing map as protoclusters, which were classified into the smaller number of clusters by K-means to make a voxel-based diffusion tensor-based clustered image. Furthermore, we also determined if the diffusion tensor-based clustered image was really helpful for predicting pre-operative glioma grade in a supervised manner. The ratio of each class in the diffusion tensor-based clustered images was calculated from the regions of interest manually traced on the diffusion tensor imaging space, and the common logarithmic ratio scales were calculated. We then applied support vector machine as a classifier for distinguishing between low- and high-grade gliomas. Consequently, the sensitivity, specificity, accuracy and area under the curve of receiver operating characteristic curves from the 16-class diffusion tensor-based clustered images that showed the best performance for differentiating high- and low-grade gliomas were 0.848, 0.745, 0.804 and 0.912, respectively. Furthermore, the log-ratio value of each class of the 16-class diffusion tensor-based clustered images was compared between low- and high-grade gliomas, and the log-ratio values of classes 14, 15 and 16 in the high-grade gliomas were significantly higher than those in the low-grade gliomas (p < 0.005, p < 0.001 and p < 0.001, respectively). These classes comprised different patterns of the seven diffusion tensor imaging-based parameters. The results suggest that the multiple diffusion tensor imaging-based parameters from the voxel-based diffusion tensor-based clustered images can help differentiate between low- and high-grade gliomas.
topic Glioma grading
Diffusion tensor imaging
Voxel-based clustering
Self-organizing map
K-means
Support vector machine
url http://www.sciencedirect.com/science/article/pii/S2213158214001107
work_keys_str_mv AT rikainano voxelbasedclusteredimagingbymultiparameterdiffusiontensorimagesforgliomagrading
AT naoyaoishi voxelbasedclusteredimagingbymultiparameterdiffusiontensorimagesforgliomagrading
AT takeharukunieda voxelbasedclusteredimagingbymultiparameterdiffusiontensorimagesforgliomagrading
AT yoshikiarakawa voxelbasedclusteredimagingbymultiparameterdiffusiontensorimagesforgliomagrading
AT yukihiroyamao voxelbasedclusteredimagingbymultiparameterdiffusiontensorimagesforgliomagrading
AT sumiyashibata voxelbasedclusteredimagingbymultiparameterdiffusiontensorimagesforgliomagrading
AT takayukikikuchi voxelbasedclusteredimagingbymultiparameterdiffusiontensorimagesforgliomagrading
AT hidenaofukuyama voxelbasedclusteredimagingbymultiparameterdiffusiontensorimagesforgliomagrading
AT susumumiyamoto voxelbasedclusteredimagingbymultiparameterdiffusiontensorimagesforgliomagrading
_version_ 1716826140760342528
spelling doaj-f54b64e2efa1470c8f9d1857e6512fb32020-11-24T20:40:39ZengElsevierNeuroImage: Clinical2213-15822014-01-015C39640710.1016/j.nicl.2014.08.001Voxel-based clustered imaging by multiparameter diffusion tensor images for glioma gradingRika Inano0Naoya Oishi1Takeharu Kunieda2Yoshiki Arakawa3Yukihiro Yamao4Sumiya Shibata5Takayuki Kikuchi6Hidenao Fukuyama7Susumu Miyamoto8Department of Neurosurgery, Kyoto University Graduate School of Medicine, Kyoto, JapanHuman Brain Research Center, Kyoto University Graduate School of Medicine, Kyoto, JapanDepartment of Neurosurgery, Kyoto University Graduate School of Medicine, Kyoto, JapanDepartment of Neurosurgery, Kyoto University Graduate School of Medicine, Kyoto, JapanDepartment of Neurosurgery, Kyoto University Graduate School of Medicine, Kyoto, JapanDepartment of Neurosurgery, Kyoto University Graduate School of Medicine, Kyoto, JapanDepartment of Neurosurgery, Kyoto University Graduate School of Medicine, Kyoto, JapanHuman Brain Research Center, Kyoto University Graduate School of Medicine, Kyoto, JapanDepartment of Neurosurgery, Kyoto University Graduate School of Medicine, Kyoto, Japan Gliomas are the most common intra-axial primary brain tumour; therefore, predicting glioma grade would influence therapeutic strategies. Although several methods based on single or multiple parameters from diagnostic images exist, a definitive method for pre-operatively determining glioma grade remains unknown. We aimed to develop an unsupervised method using multiple parameters from pre-operative diffusion tensor images for obtaining a clustered image that could enable visual grading of gliomas. Fourteen patients with low-grade gliomas and 19 with high-grade gliomas underwent diffusion tensor imaging and three-dimensional T1-weighted magnetic resonance imaging before tumour resection. Seven features including diffusion-weighted imaging, fractional anisotropy, first eigenvalue, second eigenvalue, third eigenvalue, mean diffusivity and raw T2 signal with no diffusion weighting, were extracted as multiple parameters from diffusion tensor imaging. We developed a two-level clustering approach for a self-organizing map followed by the K-means algorithm to enable unsupervised clustering of a large number of input vectors with the seven features for the whole brain. The vectors were grouped by the self-organizing map as protoclusters, which were classified into the smaller number of clusters by K-means to make a voxel-based diffusion tensor-based clustered image. Furthermore, we also determined if the diffusion tensor-based clustered image was really helpful for predicting pre-operative glioma grade in a supervised manner. The ratio of each class in the diffusion tensor-based clustered images was calculated from the regions of interest manually traced on the diffusion tensor imaging space, and the common logarithmic ratio scales were calculated. We then applied support vector machine as a classifier for distinguishing between low- and high-grade gliomas. Consequently, the sensitivity, specificity, accuracy and area under the curve of receiver operating characteristic curves from the 16-class diffusion tensor-based clustered images that showed the best performance for differentiating high- and low-grade gliomas were 0.848, 0.745, 0.804 and 0.912, respectively. Furthermore, the log-ratio value of each class of the 16-class diffusion tensor-based clustered images was compared between low- and high-grade gliomas, and the log-ratio values of classes 14, 15 and 16 in the high-grade gliomas were significantly higher than those in the low-grade gliomas (p < 0.005, p < 0.001 and p < 0.001, respectively). These classes comprised different patterns of the seven diffusion tensor imaging-based parameters. The results suggest that the multiple diffusion tensor imaging-based parameters from the voxel-based diffusion tensor-based clustered images can help differentiate between low- and high-grade gliomas. http://www.sciencedirect.com/science/article/pii/S2213158214001107Glioma gradingDiffusion tensor imagingVoxel-based clusteringSelf-organizing mapK-meansSupport vector machine