On the use of algebraic topology concepts to check the consistency of genome assembly
This paper presents a preliminary work consisting of two contributions. The first one is the design of a very efficient algorithm based on an “Overlap-Layout-Consensus” (OLC) graph to assemble the long reads provided by 3rd generation technologies. The second concerns the analysis of this graph usin...
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| Format: | Article |
| Language: | English |
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The Biophysical Society of Japan
2019-11-01
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| Series: | Biophysics and Physicobiology |
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| Online Access: | https://doi.org/10.2142/biophysico.16.0_444 |