Selecting among Alternative Scenarios of Human Evolution by Simulated Genetic Gradients

Selecting among alternative scenarios of human evolution is nowadays a common methodology to investigate the history of our species. This strategy is usually based on computer simulations of genetic data under different evolutionary scenarios, followed by a fitting of the simulated data with the rea...

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Main Authors: Catarina Branco, Miguel Arenas
Format: Article
Language:English
Published: MDPI AG 2018-10-01
Series:Genes
Subjects:
Online Access:http://www.mdpi.com/2073-4425/9/10/506
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spelling doaj-f4cabc427048425182468bd3775620382020-11-24T21:47:41ZengMDPI AGGenes2073-44252018-10-0191050610.3390/genes9100506genes9100506Selecting among Alternative Scenarios of Human Evolution by Simulated Genetic GradientsCatarina Branco0Miguel Arenas1Department of Biochemistry, Genetics and Immunology, University of Vigo, 36310 Vigo, SpainDepartment of Biochemistry, Genetics and Immunology, University of Vigo, 36310 Vigo, SpainSelecting among alternative scenarios of human evolution is nowadays a common methodology to investigate the history of our species. This strategy is usually based on computer simulations of genetic data under different evolutionary scenarios, followed by a fitting of the simulated data with the real data. A recent trend in the investigation of ancestral evolutionary processes of modern humans is the application of genetic gradients as a measure of fitting, since evolutionary processes such as range expansions, range contractions, and population admixture (among others) can lead to different genetic gradients. In addition, this strategy allows the analysis of the genetic causes of the observed genetic gradients. Here, we review recent findings on the selection among alternative scenarios of human evolution based on simulated genetic gradients, including pros and cons. First, we describe common methodologies to simulate genetic gradients and apply them to select among alternative scenarios of human evolution. Next, we review previous studies on the influence of range expansions, population admixture, last glacial period, and migration with long-distance dispersal on genetic gradients for some regions of the world. Finally, we discuss this analytical approach, including technical limitations, required improvements, and advice. Although here we focus on human evolution, this approach could be extended to study other species.http://www.mdpi.com/2073-4425/9/10/506human genetic gradientshuman evolutionmodel selectionrange expansionrange contractionlast glacial maximumlong-distance dispersalallele surfing
collection DOAJ
language English
format Article
sources DOAJ
author Catarina Branco
Miguel Arenas
spellingShingle Catarina Branco
Miguel Arenas
Selecting among Alternative Scenarios of Human Evolution by Simulated Genetic Gradients
Genes
human genetic gradients
human evolution
model selection
range expansion
range contraction
last glacial maximum
long-distance dispersal
allele surfing
author_facet Catarina Branco
Miguel Arenas
author_sort Catarina Branco
title Selecting among Alternative Scenarios of Human Evolution by Simulated Genetic Gradients
title_short Selecting among Alternative Scenarios of Human Evolution by Simulated Genetic Gradients
title_full Selecting among Alternative Scenarios of Human Evolution by Simulated Genetic Gradients
title_fullStr Selecting among Alternative Scenarios of Human Evolution by Simulated Genetic Gradients
title_full_unstemmed Selecting among Alternative Scenarios of Human Evolution by Simulated Genetic Gradients
title_sort selecting among alternative scenarios of human evolution by simulated genetic gradients
publisher MDPI AG
series Genes
issn 2073-4425
publishDate 2018-10-01
description Selecting among alternative scenarios of human evolution is nowadays a common methodology to investigate the history of our species. This strategy is usually based on computer simulations of genetic data under different evolutionary scenarios, followed by a fitting of the simulated data with the real data. A recent trend in the investigation of ancestral evolutionary processes of modern humans is the application of genetic gradients as a measure of fitting, since evolutionary processes such as range expansions, range contractions, and population admixture (among others) can lead to different genetic gradients. In addition, this strategy allows the analysis of the genetic causes of the observed genetic gradients. Here, we review recent findings on the selection among alternative scenarios of human evolution based on simulated genetic gradients, including pros and cons. First, we describe common methodologies to simulate genetic gradients and apply them to select among alternative scenarios of human evolution. Next, we review previous studies on the influence of range expansions, population admixture, last glacial period, and migration with long-distance dispersal on genetic gradients for some regions of the world. Finally, we discuss this analytical approach, including technical limitations, required improvements, and advice. Although here we focus on human evolution, this approach could be extended to study other species.
topic human genetic gradients
human evolution
model selection
range expansion
range contraction
last glacial maximum
long-distance dispersal
allele surfing
url http://www.mdpi.com/2073-4425/9/10/506
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