The effect of DNA methylation on bumblebee colony development

Abstract Background Although around 1% of cytosines in bees’ genomes are known to be methylated, less is known about methylation’s effect on bee behavior and fitness. Chemically altered DNA methylation levels have shown clear changes in the dominance and reproductive behavior of workers in queen-les...

Full description

Bibliographic Details
Main Authors: María I. Pozo, Benjamin J. Hunt, Gaby Van Kemenade, Jose M. Guerra-Sanz, Felix Wäckers, Eamonn B. Mallon, Hans Jacquemyn
Format: Article
Language:English
Published: BMC 2021-01-01
Series:BMC Genomics
Subjects:
Online Access:https://doi.org/10.1186/s12864-021-07371-1
id doaj-f416c70408b345cc94d5be183914a2c5
record_format Article
spelling doaj-f416c70408b345cc94d5be183914a2c52021-01-24T12:20:49ZengBMCBMC Genomics1471-21642021-01-0122111110.1186/s12864-021-07371-1The effect of DNA methylation on bumblebee colony developmentMaría I. Pozo0Benjamin J. Hunt1Gaby Van Kemenade2Jose M. Guerra-Sanz3Felix Wäckers4Eamonn B. Mallon5Hans Jacquemyn6KU Leuven, Biology Department, Plant Population and Conservation BiologyDepartment of Genetics and Genome Biology, University of LeicesterBiobest Group, Research and DevelopmentIndependent ResearcherBiobest Group, Research and DevelopmentDepartment of Genetics and Genome Biology, University of LeicesterKU Leuven, Biology Department, Plant Population and Conservation BiologyAbstract Background Although around 1% of cytosines in bees’ genomes are known to be methylated, less is known about methylation’s effect on bee behavior and fitness. Chemically altered DNA methylation levels have shown clear changes in the dominance and reproductive behavior of workers in queen-less colonies, but the global effect of DNA methylation on caste determination and colony development remains unclear, mainly because of difficulties in controlling for genetic differences among experimental subjects in the parental line. Here, we investigated the effect of the methylation altering agent decitabine on the developmental rate of full bumblebee colonies. Whole genome bisulfite sequencing was used to assess differences in methylation status. Results Our results showed fewer methylated loci in the control group. A total of 22 CpG loci were identified as significantly differentially methylated between treated and control workers with a change in methylation levels of 10% or more. Loci that were methylated differentially between groups participated in pathways including neuron function, oocyte regulation and metabolic processes. Treated colonies tended to develop faster, and therefore more workers were found at a given developmental stage. However, male production followed the opposite trend and it tended to be higher in control colonies. Conclusion Overall, our results indicate that altered methylation patterns resulted in an improved cooperation between workers, while there were no signs of abnormal worker dominance or caste determination.https://doi.org/10.1186/s12864-021-07371-1DNA methylationSocial insectsEpigeneticsColony development
collection DOAJ
language English
format Article
sources DOAJ
author María I. Pozo
Benjamin J. Hunt
Gaby Van Kemenade
Jose M. Guerra-Sanz
Felix Wäckers
Eamonn B. Mallon
Hans Jacquemyn
spellingShingle María I. Pozo
Benjamin J. Hunt
Gaby Van Kemenade
Jose M. Guerra-Sanz
Felix Wäckers
Eamonn B. Mallon
Hans Jacquemyn
The effect of DNA methylation on bumblebee colony development
BMC Genomics
DNA methylation
Social insects
Epigenetics
Colony development
author_facet María I. Pozo
Benjamin J. Hunt
Gaby Van Kemenade
Jose M. Guerra-Sanz
Felix Wäckers
Eamonn B. Mallon
Hans Jacquemyn
author_sort María I. Pozo
title The effect of DNA methylation on bumblebee colony development
title_short The effect of DNA methylation on bumblebee colony development
title_full The effect of DNA methylation on bumblebee colony development
title_fullStr The effect of DNA methylation on bumblebee colony development
title_full_unstemmed The effect of DNA methylation on bumblebee colony development
title_sort effect of dna methylation on bumblebee colony development
publisher BMC
series BMC Genomics
issn 1471-2164
publishDate 2021-01-01
description Abstract Background Although around 1% of cytosines in bees’ genomes are known to be methylated, less is known about methylation’s effect on bee behavior and fitness. Chemically altered DNA methylation levels have shown clear changes in the dominance and reproductive behavior of workers in queen-less colonies, but the global effect of DNA methylation on caste determination and colony development remains unclear, mainly because of difficulties in controlling for genetic differences among experimental subjects in the parental line. Here, we investigated the effect of the methylation altering agent decitabine on the developmental rate of full bumblebee colonies. Whole genome bisulfite sequencing was used to assess differences in methylation status. Results Our results showed fewer methylated loci in the control group. A total of 22 CpG loci were identified as significantly differentially methylated between treated and control workers with a change in methylation levels of 10% or more. Loci that were methylated differentially between groups participated in pathways including neuron function, oocyte regulation and metabolic processes. Treated colonies tended to develop faster, and therefore more workers were found at a given developmental stage. However, male production followed the opposite trend and it tended to be higher in control colonies. Conclusion Overall, our results indicate that altered methylation patterns resulted in an improved cooperation between workers, while there were no signs of abnormal worker dominance or caste determination.
topic DNA methylation
Social insects
Epigenetics
Colony development
url https://doi.org/10.1186/s12864-021-07371-1
work_keys_str_mv AT mariaipozo theeffectofdnamethylationonbumblebeecolonydevelopment
AT benjaminjhunt theeffectofdnamethylationonbumblebeecolonydevelopment
AT gabyvankemenade theeffectofdnamethylationonbumblebeecolonydevelopment
AT josemguerrasanz theeffectofdnamethylationonbumblebeecolonydevelopment
AT felixwackers theeffectofdnamethylationonbumblebeecolonydevelopment
AT eamonnbmallon theeffectofdnamethylationonbumblebeecolonydevelopment
AT hansjacquemyn theeffectofdnamethylationonbumblebeecolonydevelopment
AT mariaipozo effectofdnamethylationonbumblebeecolonydevelopment
AT benjaminjhunt effectofdnamethylationonbumblebeecolonydevelopment
AT gabyvankemenade effectofdnamethylationonbumblebeecolonydevelopment
AT josemguerrasanz effectofdnamethylationonbumblebeecolonydevelopment
AT felixwackers effectofdnamethylationonbumblebeecolonydevelopment
AT eamonnbmallon effectofdnamethylationonbumblebeecolonydevelopment
AT hansjacquemyn effectofdnamethylationonbumblebeecolonydevelopment
_version_ 1724326051678519296