Metabarcoding of soil nematodes: the importance of taxonomic coverage and availability of reference sequences in choosing suitable marker(s)
For many organisms, there is agreement on the specific genomic region used for developing barcode markers. With nematodes, however, it has been found that the COI region designated for most animals lacks the taxonomic coverage (ability to amplify a diverse group of taxa) required o...
Main Authors: | Mohammed Ahmed, Matthew Alan Back, Thomas Prior, Gerrit Karssen, Rebecca Lawson, Ian Adams, Melanie Sapp |
---|---|
Format: | Article |
Language: | English |
Published: |
Pensoft Publishers
2019-11-01
|
Series: | Metabarcoding and Metagenomics |
Online Access: | https://mbmg.pensoft.net/article/36408/download/pdf/ |
Similar Items
-
Technological advancements and their importance for nematode identification
by: M. Ahmed, et al.
Published: (2016-06-01) -
Increased performance of DNA metabarcoding of macroinvertebrates by taxonomic sorting.
by: Kevin K Beentjes, et al.
Published: (2019-01-01) -
Evaluation of Metabarcoding Primers for Analysis of Soil Nematode Communities
by: Md. Maniruzzaman Sikder, et al.
Published: (2020-10-01) -
Metabarcoding free‐living marine nematodes using curated 18S and CO1 reference sequence databases for species‐level taxonomic assignments
by: Lara Macheriotou, et al.
Published: (2019-02-01) -
New Insights Into Nematode DNA-metabarcoding as Revealed by the Characterization of Artificial and Spiked Nematode Communities
by: Lieven Waeyenberge, et al.
Published: (2019-04-01)