Gene expression profile of the skin in the 'hairpoor' (<it>Hr<sup>Hp</sup></it>) mice by microarray analysis
<p>Abstract</p> <p>Background</p> <p>The transcriptional cofactor, Hairless (HR), acts as one of the key regulators of hair follicle cycling; the loss of function mutations is the cause of the expression of the hairless phenotype in humans and mice. Recently, we reporte...
Main Authors: | , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2010-11-01
|
Series: | BMC Genomics |
Online Access: | http://www.biomedcentral.com/1471-2164/11/640 |
id |
doaj-f2a5cd7055fd45c38b3330487613cc99 |
---|---|
record_format |
Article |
spelling |
doaj-f2a5cd7055fd45c38b3330487613cc992020-11-24T22:38:51ZengBMCBMC Genomics1471-21642010-11-0111164010.1186/1471-2164-11-640Gene expression profile of the skin in the 'hairpoor' (<it>Hr<sup>Hp</sup></it>) mice by microarray analysisSong Hae-HiangKim Jeong-KiLee Hwa-YoungBaek In-CheolKim Bong-KyuYoon Sungjoo K<p>Abstract</p> <p>Background</p> <p>The transcriptional cofactor, Hairless (HR), acts as one of the key regulators of hair follicle cycling; the loss of function mutations is the cause of the expression of the hairless phenotype in humans and mice. Recently, we reported a new <it>Hr </it>mutant mouse called 'Hairpoor' (<it>Hr<sup>Hp</sup></it>). These mutants harbor a gain of the function mutation, T403A, in the <it>Hr </it>gene. This confers the overexpression of HR and <it>Hr<sup>Hp </sup></it>is an animal model of Marie Unna hereditary hypotrichosis in humans. In the present study, the expression profile of <it>Hr<sup>Hp</sup>/Hr<sup>Hp </sup></it>skin was investigated using microarray analysis to identify genes whose expression was affected by the overexpression of HR.</p> <p>Results</p> <p>From 45,282 mouse probes, differential expressions in 43 (>2-fold), 306 (>1.5-fold), and 1861 genes (>1.2-fold) in skin from <it>Hr<sup>Hp</sup>/Hr<sup>Hp </sup></it>mice were discovered and compared with skin from wild-type mice. Among the 1861 genes with a > 1.2-fold increase in expression, further analysis showed that the expression of eight genes known to have a close relationship with hair follicle development, ascertained by conducting real-time PCR on skin RNA produced during hair follicle morphogenesis (P0-P14), indicated that four genes, <it>Wif1</it>, <it>Casp14</it>, <it>Krt71</it>, and <it>Sfrp1</it>, showed a consistent expression pattern with respect to HR overexpression in vivo.</p> <p>Conclusion</p> <p><it>Wif1 </it>and <it>Casp14 </it>were found to be upregulated, whereas <it>Krt71 </it>and <it>Sfrp1 </it>were downregulated in cells overexpressing HR in transient transfection experiments on keratinocytes, suggesting that HR may transcriptionally regulate these genes. Further studies are required to understand the mechanism of this regulation by the HR cofactor.</p> http://www.biomedcentral.com/1471-2164/11/640 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Song Hae-Hiang Kim Jeong-Ki Lee Hwa-Young Baek In-Cheol Kim Bong-Kyu Yoon Sungjoo K |
spellingShingle |
Song Hae-Hiang Kim Jeong-Ki Lee Hwa-Young Baek In-Cheol Kim Bong-Kyu Yoon Sungjoo K Gene expression profile of the skin in the 'hairpoor' (<it>Hr<sup>Hp</sup></it>) mice by microarray analysis BMC Genomics |
author_facet |
Song Hae-Hiang Kim Jeong-Ki Lee Hwa-Young Baek In-Cheol Kim Bong-Kyu Yoon Sungjoo K |
author_sort |
Song Hae-Hiang |
title |
Gene expression profile of the skin in the 'hairpoor' (<it>Hr<sup>Hp</sup></it>) mice by microarray analysis |
title_short |
Gene expression profile of the skin in the 'hairpoor' (<it>Hr<sup>Hp</sup></it>) mice by microarray analysis |
title_full |
Gene expression profile of the skin in the 'hairpoor' (<it>Hr<sup>Hp</sup></it>) mice by microarray analysis |
title_fullStr |
Gene expression profile of the skin in the 'hairpoor' (<it>Hr<sup>Hp</sup></it>) mice by microarray analysis |
title_full_unstemmed |
Gene expression profile of the skin in the 'hairpoor' (<it>Hr<sup>Hp</sup></it>) mice by microarray analysis |
title_sort |
gene expression profile of the skin in the 'hairpoor' (<it>hr<sup>hp</sup></it>) mice by microarray analysis |
publisher |
BMC |
series |
BMC Genomics |
issn |
1471-2164 |
publishDate |
2010-11-01 |
description |
<p>Abstract</p> <p>Background</p> <p>The transcriptional cofactor, Hairless (HR), acts as one of the key regulators of hair follicle cycling; the loss of function mutations is the cause of the expression of the hairless phenotype in humans and mice. Recently, we reported a new <it>Hr </it>mutant mouse called 'Hairpoor' (<it>Hr<sup>Hp</sup></it>). These mutants harbor a gain of the function mutation, T403A, in the <it>Hr </it>gene. This confers the overexpression of HR and <it>Hr<sup>Hp </sup></it>is an animal model of Marie Unna hereditary hypotrichosis in humans. In the present study, the expression profile of <it>Hr<sup>Hp</sup>/Hr<sup>Hp </sup></it>skin was investigated using microarray analysis to identify genes whose expression was affected by the overexpression of HR.</p> <p>Results</p> <p>From 45,282 mouse probes, differential expressions in 43 (>2-fold), 306 (>1.5-fold), and 1861 genes (>1.2-fold) in skin from <it>Hr<sup>Hp</sup>/Hr<sup>Hp </sup></it>mice were discovered and compared with skin from wild-type mice. Among the 1861 genes with a > 1.2-fold increase in expression, further analysis showed that the expression of eight genes known to have a close relationship with hair follicle development, ascertained by conducting real-time PCR on skin RNA produced during hair follicle morphogenesis (P0-P14), indicated that four genes, <it>Wif1</it>, <it>Casp14</it>, <it>Krt71</it>, and <it>Sfrp1</it>, showed a consistent expression pattern with respect to HR overexpression in vivo.</p> <p>Conclusion</p> <p><it>Wif1 </it>and <it>Casp14 </it>were found to be upregulated, whereas <it>Krt71 </it>and <it>Sfrp1 </it>were downregulated in cells overexpressing HR in transient transfection experiments on keratinocytes, suggesting that HR may transcriptionally regulate these genes. Further studies are required to understand the mechanism of this regulation by the HR cofactor.</p> |
url |
http://www.biomedcentral.com/1471-2164/11/640 |
work_keys_str_mv |
AT songhaehiang geneexpressionprofileoftheskininthehairpoorithrsuphpsupitmicebymicroarrayanalysis AT kimjeongki geneexpressionprofileoftheskininthehairpoorithrsuphpsupitmicebymicroarrayanalysis AT leehwayoung geneexpressionprofileoftheskininthehairpoorithrsuphpsupitmicebymicroarrayanalysis AT baekincheol geneexpressionprofileoftheskininthehairpoorithrsuphpsupitmicebymicroarrayanalysis AT kimbongkyu geneexpressionprofileoftheskininthehairpoorithrsuphpsupitmicebymicroarrayanalysis AT yoonsungjook geneexpressionprofileoftheskininthehairpoorithrsuphpsupitmicebymicroarrayanalysis |
_version_ |
1725711529341353984 |