UAV-BASED SORGHUM GROWTH MONITORING: A COMPARATIVE ANALYSIS OF LIDAR AND PHOTOGRAMMETRY

Canopy height (CH) and leaf area index (LAI) provide key information about crop growth and productivity. A rapid and accurate retrieval of CH and LAI is critical for a variety of agricultural applications. LiDAR and RGB photogrammetry have been increasingly used in plant phenotyping in recent years...

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Main Authors: M. Maimaitijiang, V. Sagan, H. Erkbol, J. Adrian, M. Newcomb, D. LeBauer, D. Pauli, N. Shakoor, T. C. Mockler
Format: Article
Language:English
Published: Copernicus Publications 2020-08-01
Series:ISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences
Online Access:https://www.isprs-ann-photogramm-remote-sens-spatial-inf-sci.net/V-3-2020/489/2020/isprs-annals-V-3-2020-489-2020.pdf
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spelling doaj-f2a3607c4d2e4b85a47b0241e3bdd2e22020-11-25T03:21:33ZengCopernicus PublicationsISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences2194-90422194-90502020-08-01V-3-202048949610.5194/isprs-annals-V-3-2020-489-2020UAV-BASED SORGHUM GROWTH MONITORING: A COMPARATIVE ANALYSIS OF LIDAR AND PHOTOGRAMMETRYM. Maimaitijiang0M. Maimaitijiang1V. Sagan2V. Sagan3H. Erkbol4H. Erkbol5J. Adrian6J. Adrian7M. Newcomb8D. LeBauer9D. Pauli10N. Shakoor11T. C. Mockler12Geospatial Institute, Saint Louis University, 3694 West Pine Mall, St. Louis, MO 63108, USADepartment of Earth and Atmospheric Sciences, Saint Louis University, St. Louis, MO 63108, USAGeospatial Institute, Saint Louis University, 3694 West Pine Mall, St. Louis, MO 63108, USADepartment of Earth and Atmospheric Sciences, Saint Louis University, St. Louis, MO 63108, USAGeospatial Institute, Saint Louis University, 3694 West Pine Mall, St. Louis, MO 63108, USADepartment of Earth and Atmospheric Sciences, Saint Louis University, St. Louis, MO 63108, USAGeospatial Institute, Saint Louis University, 3694 West Pine Mall, St. Louis, MO 63108, USADepartment of Earth and Atmospheric Sciences, Saint Louis University, St. Louis, MO 63108, USAUnited States Forest Service, Intermountain Region, Ogden, UT 84401, USAArizona Experiment Station, University of Arizona, Tucson, AZ 85721, USASchool of Plant Sciences, University of Arizona, Tucson, AZ 85721, USADonald Danforth Plant Science Center, St. Louis, MO 63132, USADonald Danforth Plant Science Center, St. Louis, MO 63132, USACanopy height (CH) and leaf area index (LAI) provide key information about crop growth and productivity. A rapid and accurate retrieval of CH and LAI is critical for a variety of agricultural applications. LiDAR and RGB photogrammetry have been increasingly used in plant phenotyping in recent years thanks to the developments in Unmanned Aerial Vehicle (UAV) and sensor technology. The goal of this study is to investigate the potential of UAV LiDAR and RGB photogrammetry in estimating crop CH and LAI. To this end, a high resolution 32 channel LiDAR and RGB cameras mounted on DJI Matrice 600 Pro UAV were employed to collect data at sorghum fields near Maricopa, Arizona, USA. A series of canopy structure metrics were extracted using LiDAR and RGB photogrammetry-based point clouds. Random Forest Regression (RFR) models were established based on the UAV-LiDAR and photogrammetry-derived metrics and field-measured LAI. The results show that both UAV-LiDAR and RGB photogrammetry demonstrated promising accuracies in CH extraction and LAI estimation. Overall, UAV-LiDAR yielded superior performance than RGB photogrammetry in both low and high canopy density sorghum fields. In addition, Pearson’s correlation coefficient, as well as RFR-based variable importance analysis demonstrated that height-based metrics from both LiDAR and photogrammetric point clouds were more useful than density-based metrics in LAI estimation. This study proved that UAV-based LiDAR and photogrammetry are important tool in sustainable field management and high-throughput phenotyping, but LiDAR is more accurate than RGB photogrammetry due to its greater canopy penetration capability.https://www.isprs-ann-photogramm-remote-sens-spatial-inf-sci.net/V-3-2020/489/2020/isprs-annals-V-3-2020-489-2020.pdf
collection DOAJ
language English
format Article
sources DOAJ
author M. Maimaitijiang
M. Maimaitijiang
V. Sagan
V. Sagan
H. Erkbol
H. Erkbol
J. Adrian
J. Adrian
M. Newcomb
D. LeBauer
D. Pauli
N. Shakoor
T. C. Mockler
spellingShingle M. Maimaitijiang
M. Maimaitijiang
V. Sagan
V. Sagan
H. Erkbol
H. Erkbol
J. Adrian
J. Adrian
M. Newcomb
D. LeBauer
D. Pauli
N. Shakoor
T. C. Mockler
UAV-BASED SORGHUM GROWTH MONITORING: A COMPARATIVE ANALYSIS OF LIDAR AND PHOTOGRAMMETRY
ISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences
author_facet M. Maimaitijiang
M. Maimaitijiang
V. Sagan
V. Sagan
H. Erkbol
H. Erkbol
J. Adrian
J. Adrian
M. Newcomb
D. LeBauer
D. Pauli
N. Shakoor
T. C. Mockler
author_sort M. Maimaitijiang
title UAV-BASED SORGHUM GROWTH MONITORING: A COMPARATIVE ANALYSIS OF LIDAR AND PHOTOGRAMMETRY
title_short UAV-BASED SORGHUM GROWTH MONITORING: A COMPARATIVE ANALYSIS OF LIDAR AND PHOTOGRAMMETRY
title_full UAV-BASED SORGHUM GROWTH MONITORING: A COMPARATIVE ANALYSIS OF LIDAR AND PHOTOGRAMMETRY
title_fullStr UAV-BASED SORGHUM GROWTH MONITORING: A COMPARATIVE ANALYSIS OF LIDAR AND PHOTOGRAMMETRY
title_full_unstemmed UAV-BASED SORGHUM GROWTH MONITORING: A COMPARATIVE ANALYSIS OF LIDAR AND PHOTOGRAMMETRY
title_sort uav-based sorghum growth monitoring: a comparative analysis of lidar and photogrammetry
publisher Copernicus Publications
series ISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences
issn 2194-9042
2194-9050
publishDate 2020-08-01
description Canopy height (CH) and leaf area index (LAI) provide key information about crop growth and productivity. A rapid and accurate retrieval of CH and LAI is critical for a variety of agricultural applications. LiDAR and RGB photogrammetry have been increasingly used in plant phenotyping in recent years thanks to the developments in Unmanned Aerial Vehicle (UAV) and sensor technology. The goal of this study is to investigate the potential of UAV LiDAR and RGB photogrammetry in estimating crop CH and LAI. To this end, a high resolution 32 channel LiDAR and RGB cameras mounted on DJI Matrice 600 Pro UAV were employed to collect data at sorghum fields near Maricopa, Arizona, USA. A series of canopy structure metrics were extracted using LiDAR and RGB photogrammetry-based point clouds. Random Forest Regression (RFR) models were established based on the UAV-LiDAR and photogrammetry-derived metrics and field-measured LAI. The results show that both UAV-LiDAR and RGB photogrammetry demonstrated promising accuracies in CH extraction and LAI estimation. Overall, UAV-LiDAR yielded superior performance than RGB photogrammetry in both low and high canopy density sorghum fields. In addition, Pearson’s correlation coefficient, as well as RFR-based variable importance analysis demonstrated that height-based metrics from both LiDAR and photogrammetric point clouds were more useful than density-based metrics in LAI estimation. This study proved that UAV-based LiDAR and photogrammetry are important tool in sustainable field management and high-throughput phenotyping, but LiDAR is more accurate than RGB photogrammetry due to its greater canopy penetration capability.
url https://www.isprs-ann-photogramm-remote-sens-spatial-inf-sci.net/V-3-2020/489/2020/isprs-annals-V-3-2020-489-2020.pdf
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