Nitrifiers drive successions of particulate organic matter and microbial community composition in a starved macrocosm

Organic carbon produced by nitrifiers plays an important role in maintaining the microbial metabolism in the aphotic ocean layer with carbon and energy scarcity. However, the contribution of nitrifiers to organic carbon processing remains unclear. To explore how nitrification impacts the material cy...

Full description

Bibliographic Details
Main Authors: Lianbao Zhang, Mingming Chen, Xiaowei Chen, Jianning Wang, Yu Zhang, Xilin Xiao, Chen Hu, Jihua Liu, Rui Zhang, Dapeng Xu, Nianzhi Jiao, Yao Zhang
Format: Article
Language:English
Published: Elsevier 2021-12-01
Series:Environment International
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S0160412021004013
id doaj-f27dce6016be4e1e8a93dede7077fd4e
record_format Article
spelling doaj-f27dce6016be4e1e8a93dede7077fd4e2021-10-01T04:45:31ZengElsevierEnvironment International0160-41202021-12-01157106776Nitrifiers drive successions of particulate organic matter and microbial community composition in a starved macrocosmLianbao Zhang0Mingming Chen1Xiaowei Chen2Jianning Wang3Yu Zhang4Xilin Xiao5Chen Hu6Jihua Liu7Rui Zhang8Dapeng Xu9Nianzhi Jiao10Yao Zhang11State Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, ChinaState Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, ChinaState Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, ChinaState Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, ChinaState Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, ChinaState Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, ChinaState Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, ChinaInstitute of Marine Science and Technology, Shandong University, Qinagdao 266237, ChinaState Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, ChinaState Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, ChinaState Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, ChinaState Key Laboratory of Marine Environmental Science and College of Ocean and Earth Sciences, Xiamen University, Xiamen 361101, China; Corresponding author.Organic carbon produced by nitrifiers plays an important role in maintaining the microbial metabolism in the aphotic ocean layer with carbon and energy scarcity. However, the contribution of nitrifiers to organic carbon processing remains unclear. To explore how nitrification impacts the material cycle in the starved ecosystem, we set up an ultra-large volume, long-term incubation experiment. Seawater collected from the Halifax coastal ocean was pumped into the Aquatron Tower Tank located at Dalhousie University, Canada, and was incubated under dark conditions for 73 days. The results indicated that the relative abundance of nitrifiers increased and nitrification was strengthened in the dark system where energy and organic carbon were scarce. The importance of nitrogenous compounds in particulate materials increased over the course of the incubation. Correlation analysis showed that the relative abundances of nitrifiers and particulate organic compounds containing nitrogen were significantly and positively correlated. Furthermore, network analysis suggested that metabolic processes related to nitrogenous and aromatic compounds are most important to particle associated bacteria. This study suggests that the nitrifiers could produce a series of organic compounds that result in the alteration of organic matter composition by promoting the degradation of recalcitrant aromatic compounds, which has important implications for organic matter processing in the starved dark ecosystem.http://www.sciencedirect.com/science/article/pii/S0160412021004013NitrifiersNitrificationParticulate organic matterNitrogenous compoundsAromatic compoundsStarved dark ecosystem
collection DOAJ
language English
format Article
sources DOAJ
author Lianbao Zhang
Mingming Chen
Xiaowei Chen
Jianning Wang
Yu Zhang
Xilin Xiao
Chen Hu
Jihua Liu
Rui Zhang
Dapeng Xu
Nianzhi Jiao
Yao Zhang
spellingShingle Lianbao Zhang
Mingming Chen
Xiaowei Chen
Jianning Wang
Yu Zhang
Xilin Xiao
Chen Hu
Jihua Liu
Rui Zhang
Dapeng Xu
Nianzhi Jiao
Yao Zhang
Nitrifiers drive successions of particulate organic matter and microbial community composition in a starved macrocosm
Environment International
Nitrifiers
Nitrification
Particulate organic matter
Nitrogenous compounds
Aromatic compounds
Starved dark ecosystem
author_facet Lianbao Zhang
Mingming Chen
Xiaowei Chen
Jianning Wang
Yu Zhang
Xilin Xiao
Chen Hu
Jihua Liu
Rui Zhang
Dapeng Xu
Nianzhi Jiao
Yao Zhang
author_sort Lianbao Zhang
title Nitrifiers drive successions of particulate organic matter and microbial community composition in a starved macrocosm
title_short Nitrifiers drive successions of particulate organic matter and microbial community composition in a starved macrocosm
title_full Nitrifiers drive successions of particulate organic matter and microbial community composition in a starved macrocosm
title_fullStr Nitrifiers drive successions of particulate organic matter and microbial community composition in a starved macrocosm
title_full_unstemmed Nitrifiers drive successions of particulate organic matter and microbial community composition in a starved macrocosm
title_sort nitrifiers drive successions of particulate organic matter and microbial community composition in a starved macrocosm
publisher Elsevier
series Environment International
issn 0160-4120
publishDate 2021-12-01
description Organic carbon produced by nitrifiers plays an important role in maintaining the microbial metabolism in the aphotic ocean layer with carbon and energy scarcity. However, the contribution of nitrifiers to organic carbon processing remains unclear. To explore how nitrification impacts the material cycle in the starved ecosystem, we set up an ultra-large volume, long-term incubation experiment. Seawater collected from the Halifax coastal ocean was pumped into the Aquatron Tower Tank located at Dalhousie University, Canada, and was incubated under dark conditions for 73 days. The results indicated that the relative abundance of nitrifiers increased and nitrification was strengthened in the dark system where energy and organic carbon were scarce. The importance of nitrogenous compounds in particulate materials increased over the course of the incubation. Correlation analysis showed that the relative abundances of nitrifiers and particulate organic compounds containing nitrogen were significantly and positively correlated. Furthermore, network analysis suggested that metabolic processes related to nitrogenous and aromatic compounds are most important to particle associated bacteria. This study suggests that the nitrifiers could produce a series of organic compounds that result in the alteration of organic matter composition by promoting the degradation of recalcitrant aromatic compounds, which has important implications for organic matter processing in the starved dark ecosystem.
topic Nitrifiers
Nitrification
Particulate organic matter
Nitrogenous compounds
Aromatic compounds
Starved dark ecosystem
url http://www.sciencedirect.com/science/article/pii/S0160412021004013
work_keys_str_mv AT lianbaozhang nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT mingmingchen nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT xiaoweichen nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT jianningwang nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT yuzhang nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT xilinxiao nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT chenhu nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT jihualiu nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT ruizhang nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT dapengxu nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT nianzhijiao nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
AT yaozhang nitrifiersdrivesuccessionsofparticulateorganicmatterandmicrobialcommunitycompositioninastarvedmacrocosm
_version_ 1716862363410366464