GENETIC DIVERSITY AND STRUCTURE OF Oenocarpus mapora GERMPLASM CONSERVED AT EASTERN AMAZON
ABSTRACT The aim of this study was to evaluate the genetic diversity and structure in the germoplasm of Oenocarpus mapora conserved at Eastern Amazon. Thus, 88 individuals were genotyped with five microsatellite loci. These individuals belong to 24 accessions that were sampled in eight sample place...
Main Authors: | , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Sociedade Brasileira de Fruticultura
2015-12-01
|
Series: | Revista Brasileira de Fruticultura |
Subjects: | |
Online Access: | http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-29452015000400984&lng=en&tlng=en |
id |
doaj-f27d6df9769442f29459186561a7b851 |
---|---|
record_format |
Article |
spelling |
doaj-f27d6df9769442f29459186561a7b8512020-11-24T21:22:17ZengSociedade Brasileira de FruticulturaRevista Brasileira de Fruticultura1806-99672015-12-0137498499210.1590/0100-2945-208/14S0100-29452015000400984GENETIC DIVERSITY AND STRUCTURE OF Oenocarpus mapora GERMPLASM CONSERVED AT EASTERN AMAZONELISA FERREIRA MOURAMARIA DO SOCORRO PADILHA DE OLIVEIRADIEHGO TULOZA DA SILVALÍGIA CRISTINE GONÇALVES PONTESABSTRACT The aim of this study was to evaluate the genetic diversity and structure in the germoplasm of Oenocarpus mapora conserved at Eastern Amazon. Thus, 88 individuals were genotyped with five microsatellite loci. These individuals belong to 24 accessions that were sampled in eight sample places of three Brazilian Amazon states conserved at the Active Germplasm Bank (AGB) of Embrapa Eastern Amazon. All loci were polymorphic and they generated 85 alleles with an average of 17 alleles per loci. Total genetic diversity (HE) was 0.48. Sample places were considered genetically distinct, with ?p = 0.354. The analysis of molecular variance (AMOVA) identified that the genetic portion among areas was of 36.14% and within 63.86%. The Nei distances varied from 0.091 between Abaetetuba and Santo Antônio do Tauá, both in the state of Pará (PA), to 4.18, between Parintins, AM and Rio Branco, AC. By means of Bayesian analysis, it was identified nine clusters that compose the accessions of the germplasm bank, with different distributions among individuals. The study showed high fixation rates per sample area, which indicates that there may have been significant inbreeding or crossing among parental individuals. It suggests that future samples should be made of different plants in natural populations. Even though, it was verified that there is considerable genetic variation in the germplasm of O. mapora.http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-29452015000400984&lng=en&tlng=enArecaceaemarcador molecularmicrossatélitesrecursos genéticos vegetais |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
ELISA FERREIRA MOURA MARIA DO SOCORRO PADILHA DE OLIVEIRA DIEHGO TULOZA DA SILVA LÍGIA CRISTINE GONÇALVES PONTES |
spellingShingle |
ELISA FERREIRA MOURA MARIA DO SOCORRO PADILHA DE OLIVEIRA DIEHGO TULOZA DA SILVA LÍGIA CRISTINE GONÇALVES PONTES GENETIC DIVERSITY AND STRUCTURE OF Oenocarpus mapora GERMPLASM CONSERVED AT EASTERN AMAZON Revista Brasileira de Fruticultura Arecaceae marcador molecular microssatélites recursos genéticos vegetais |
author_facet |
ELISA FERREIRA MOURA MARIA DO SOCORRO PADILHA DE OLIVEIRA DIEHGO TULOZA DA SILVA LÍGIA CRISTINE GONÇALVES PONTES |
author_sort |
ELISA FERREIRA MOURA |
title |
GENETIC DIVERSITY AND STRUCTURE OF Oenocarpus mapora GERMPLASM CONSERVED AT EASTERN AMAZON |
title_short |
GENETIC DIVERSITY AND STRUCTURE OF Oenocarpus mapora GERMPLASM CONSERVED AT EASTERN AMAZON |
title_full |
GENETIC DIVERSITY AND STRUCTURE OF Oenocarpus mapora GERMPLASM CONSERVED AT EASTERN AMAZON |
title_fullStr |
GENETIC DIVERSITY AND STRUCTURE OF Oenocarpus mapora GERMPLASM CONSERVED AT EASTERN AMAZON |
title_full_unstemmed |
GENETIC DIVERSITY AND STRUCTURE OF Oenocarpus mapora GERMPLASM CONSERVED AT EASTERN AMAZON |
title_sort |
genetic diversity and structure of oenocarpus mapora germplasm conserved at eastern amazon |
publisher |
Sociedade Brasileira de Fruticultura |
series |
Revista Brasileira de Fruticultura |
issn |
1806-9967 |
publishDate |
2015-12-01 |
description |
ABSTRACT The aim of this study was to evaluate the genetic diversity and structure in the germoplasm of Oenocarpus mapora conserved at Eastern Amazon. Thus, 88 individuals were genotyped with five microsatellite loci. These individuals belong to 24 accessions that were sampled in eight sample places of three Brazilian Amazon states conserved at the Active Germplasm Bank (AGB) of Embrapa Eastern Amazon. All loci were polymorphic and they generated 85 alleles with an average of 17 alleles per loci. Total genetic diversity (HE) was 0.48. Sample places were considered genetically distinct, with ?p = 0.354. The analysis of molecular variance (AMOVA) identified that the genetic portion among areas was of 36.14% and within 63.86%. The Nei distances varied from 0.091 between Abaetetuba and Santo Antônio do Tauá, both in the state of Pará (PA), to 4.18, between Parintins, AM and Rio Branco, AC. By means of Bayesian analysis, it was identified nine clusters that compose the accessions of the germplasm bank, with different distributions among individuals. The study showed high fixation rates per sample area, which indicates that there may have been significant inbreeding or crossing among parental individuals. It suggests that future samples should be made of different plants in natural populations. Even though, it was verified that there is considerable genetic variation in the germplasm of O. mapora. |
topic |
Arecaceae marcador molecular microssatélites recursos genéticos vegetais |
url |
http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-29452015000400984&lng=en&tlng=en |
work_keys_str_mv |
AT elisaferreiramoura geneticdiversityandstructureofoenocarpusmaporagermplasmconservedateasternamazon AT mariadosocorropadilhadeoliveira geneticdiversityandstructureofoenocarpusmaporagermplasmconservedateasternamazon AT diehgotulozadasilva geneticdiversityandstructureofoenocarpusmaporagermplasmconservedateasternamazon AT ligiacristinegoncalvespontes geneticdiversityandstructureofoenocarpusmaporagermplasmconservedateasternamazon |
_version_ |
1725996435988545536 |