Characterization of 42 Microsatellite Markers from Poison Ivy, Toxicodendron radicans (Anacardiaceae)

Poison ivy, Toxicodendron radicans, and poison oaks, T. diversilobum and T. pubescens, are perennial woody species of the Anacardiaceae and are poisonous, containing strong allergens named urushiols that cause allergic contact dermatitis. Poison ivy is a species distributed from North America to Eas...

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Main Authors: Tzen-Yuh Chiang, Yu-Chung Chiang, Tsai-Wen Hsu, Huei-Chuan Shih, Chia-Chi Kuo
Format: Article
Language:English
Published: MDPI AG 2013-10-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:http://www.mdpi.com/1422-0067/14/10/20414
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spelling doaj-f0c46eb33ab24ed6b66a330bf49d3ef22020-11-24T21:41:38ZengMDPI AGInternational Journal of Molecular Sciences1422-00672013-10-011410204142042610.3390/ijms141020414Characterization of 42 Microsatellite Markers from Poison Ivy, Toxicodendron radicans (Anacardiaceae)Tzen-Yuh ChiangYu-Chung ChiangTsai-Wen HsuHuei-Chuan ShihChia-Chi KuoPoison ivy, Toxicodendron radicans, and poison oaks, T. diversilobum and T. pubescens, are perennial woody species of the Anacardiaceae and are poisonous, containing strong allergens named urushiols that cause allergic contact dermatitis. Poison ivy is a species distributed from North America to East Asia, while T. diversilobum and T. pubescens are distributed in western and eastern North America, respectively. Phylogreography and population structure of these species remain unclear. Here, we developed microsatellite markers, via constructing a magnetic enriched microsatellite library, from poison ivy. We designed 51 primer pairs, 42 of which successfully yielded products that were subsequently tested for polymorphism in poison oak, and three subspecies of poison ivy. Among the 42 loci, 38 are polymorphic, while 4 are monomorphic. The number of alleles and the expected heterozygosity ranged from 1 to 12 and from 0.10 to 0.87, respectively, in poison ivy, while varied from 2 to 8 and, from 0.26 to 0.83, respectively in poison oak. Genetic analysis revealed distinct differentiation between poison ivy and poison oak, whereas slight genetic differentiation was detected among three subspecies of poison ivy. These highly polymorphic microsatellite fingerprints enable biologists to explore the population genetics, phylogeography, and speciation in Toxicodendron.http://www.mdpi.com/1422-0067/14/10/20414genetic diversitymicrosatellite markerspoison ivypoison oakpopulation structuringToxicodendron
collection DOAJ
language English
format Article
sources DOAJ
author Tzen-Yuh Chiang
Yu-Chung Chiang
Tsai-Wen Hsu
Huei-Chuan Shih
Chia-Chi Kuo
spellingShingle Tzen-Yuh Chiang
Yu-Chung Chiang
Tsai-Wen Hsu
Huei-Chuan Shih
Chia-Chi Kuo
Characterization of 42 Microsatellite Markers from Poison Ivy, Toxicodendron radicans (Anacardiaceae)
International Journal of Molecular Sciences
genetic diversity
microsatellite markers
poison ivy
poison oak
population structuring
Toxicodendron
author_facet Tzen-Yuh Chiang
Yu-Chung Chiang
Tsai-Wen Hsu
Huei-Chuan Shih
Chia-Chi Kuo
author_sort Tzen-Yuh Chiang
title Characterization of 42 Microsatellite Markers from Poison Ivy, Toxicodendron radicans (Anacardiaceae)
title_short Characterization of 42 Microsatellite Markers from Poison Ivy, Toxicodendron radicans (Anacardiaceae)
title_full Characterization of 42 Microsatellite Markers from Poison Ivy, Toxicodendron radicans (Anacardiaceae)
title_fullStr Characterization of 42 Microsatellite Markers from Poison Ivy, Toxicodendron radicans (Anacardiaceae)
title_full_unstemmed Characterization of 42 Microsatellite Markers from Poison Ivy, Toxicodendron radicans (Anacardiaceae)
title_sort characterization of 42 microsatellite markers from poison ivy, toxicodendron radicans (anacardiaceae)
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2013-10-01
description Poison ivy, Toxicodendron radicans, and poison oaks, T. diversilobum and T. pubescens, are perennial woody species of the Anacardiaceae and are poisonous, containing strong allergens named urushiols that cause allergic contact dermatitis. Poison ivy is a species distributed from North America to East Asia, while T. diversilobum and T. pubescens are distributed in western and eastern North America, respectively. Phylogreography and population structure of these species remain unclear. Here, we developed microsatellite markers, via constructing a magnetic enriched microsatellite library, from poison ivy. We designed 51 primer pairs, 42 of which successfully yielded products that were subsequently tested for polymorphism in poison oak, and three subspecies of poison ivy. Among the 42 loci, 38 are polymorphic, while 4 are monomorphic. The number of alleles and the expected heterozygosity ranged from 1 to 12 and from 0.10 to 0.87, respectively, in poison ivy, while varied from 2 to 8 and, from 0.26 to 0.83, respectively in poison oak. Genetic analysis revealed distinct differentiation between poison ivy and poison oak, whereas slight genetic differentiation was detected among three subspecies of poison ivy. These highly polymorphic microsatellite fingerprints enable biologists to explore the population genetics, phylogeography, and speciation in Toxicodendron.
topic genetic diversity
microsatellite markers
poison ivy
poison oak
population structuring
Toxicodendron
url http://www.mdpi.com/1422-0067/14/10/20414
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