Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA

The objective of this work was the identification and differentiation of Trichogramma exiguum Pinto and Platner species, T. pretiosum Riley, and T. galloi Zucchi using sequences of the ITS2 region of ribosomal DNA. After extracting DNA from the studied species, a PCR reaction was performed, where th...

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Main Authors: NR. Santos, RP. Almeida, IQM. Padilha, DAM. Araújo, AJ. Creão-Duarte
Format: Article
Language:English
Published: Instituto Internacional de Ecologia
Series:Brazilian Journal of Biology
Subjects:
Online Access:http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842015000200020&lng=en&tlng=en
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spelling doaj-ef5ff8fa00fd465d9111a982018ee70d2020-11-24T23:39:42ZengInstituto Internacional de EcologiaBrazilian Journal of Biology1678-437575239139510.1590/1519-6984.14813S1519-69842015000200020Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNANR. SantosRP. AlmeidaIQM. PadilhaDAM. AraújoAJ. Creão-DuarteThe objective of this work was the identification and differentiation of Trichogramma exiguum Pinto and Platner species, T. pretiosum Riley, and T. galloi Zucchi using sequences of the ITS2 region of ribosomal DNA. After extracting DNA from the studied species, a PCR reaction was performed, where the amplified samples were subjected to sequencing. The sequences obtained were submitted to a similarity search in GenBank (NCBI - National Center for Biotechnology Information) using the BLAST program, aiming to determine the similarity of these sequences with the species already deposited in the referenced database, and then multiple sequences were aligned using version 2.0 of the ClustalX program. According to the results of the multiple alignments of all sequences obtained, it was possible to observe the differences between the T. pretiosum, T. galloi and T. exiguum species. It was concluded that using the sequences of the ITS2 region of the ribosomal DNA was efficient in the differentiation of the studied Trichogramma species, which suggests a strong inter-specific variation among species.http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842015000200020&lng=en&tlng=enmolecular systematicmicrohymenopteraparasitoid
collection DOAJ
language English
format Article
sources DOAJ
author NR. Santos
RP. Almeida
IQM. Padilha
DAM. Araújo
AJ. Creão-Duarte
spellingShingle NR. Santos
RP. Almeida
IQM. Padilha
DAM. Araújo
AJ. Creão-Duarte
Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA
Brazilian Journal of Biology
molecular systematic
microhymenoptera
parasitoid
author_facet NR. Santos
RP. Almeida
IQM. Padilha
DAM. Araújo
AJ. Creão-Duarte
author_sort NR. Santos
title Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA
title_short Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA
title_full Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA
title_fullStr Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA
title_full_unstemmed Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA
title_sort molecular identification of trichogramma species from regions in brazil using the sequencing of the its2 region of ribosomal dna
publisher Instituto Internacional de Ecologia
series Brazilian Journal of Biology
issn 1678-4375
description The objective of this work was the identification and differentiation of Trichogramma exiguum Pinto and Platner species, T. pretiosum Riley, and T. galloi Zucchi using sequences of the ITS2 region of ribosomal DNA. After extracting DNA from the studied species, a PCR reaction was performed, where the amplified samples were subjected to sequencing. The sequences obtained were submitted to a similarity search in GenBank (NCBI - National Center for Biotechnology Information) using the BLAST program, aiming to determine the similarity of these sequences with the species already deposited in the referenced database, and then multiple sequences were aligned using version 2.0 of the ClustalX program. According to the results of the multiple alignments of all sequences obtained, it was possible to observe the differences between the T. pretiosum, T. galloi and T. exiguum species. It was concluded that using the sequences of the ITS2 region of the ribosomal DNA was efficient in the differentiation of the studied Trichogramma species, which suggests a strong inter-specific variation among species.
topic molecular systematic
microhymenoptera
parasitoid
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842015000200020&lng=en&tlng=en
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