Evolution of Developmental GATA Factors in Nematodes

GATA transcription factors are found in animals, plants, and fungi. In animals, they have important developmental roles in controlling specification of cell identities and executing tissue-specific differentiation. The Phylum Nematoda is a diverse group of vermiform animals that inhabit ecological n...

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Main Authors: Ethan Eurmsirilerd, Morris F. Maduro
Format: Article
Language:English
Published: MDPI AG 2020-11-01
Series:Journal of Developmental Biology
Subjects:
Online Access:https://www.mdpi.com/2221-3759/8/4/27
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spelling doaj-ef1c282cac934186a02b37451eb871812020-11-25T04:11:11ZengMDPI AGJournal of Developmental Biology2221-37592020-11-018272710.3390/jdb8040027Evolution of Developmental GATA Factors in NematodesEthan Eurmsirilerd0Morris F. Maduro1Undergraduate Program in Biology, Department of Molecular, Cell, and Systems Biology, University of California, Riverside, Riverside, CA 92521, USADepartment of Molecular, Cell, and Systems Biology, University of California, Riverside, Riverside, CA 92521, USAGATA transcription factors are found in animals, plants, and fungi. In animals, they have important developmental roles in controlling specification of cell identities and executing tissue-specific differentiation. The Phylum Nematoda is a diverse group of vermiform animals that inhabit ecological niches all over the world. Both free-living and parasitic species are known, including those that cause human infectious disease. To date, GATA factors in nematodes have been studied almost exclusively in the model system <i>C. elegans </i>and its close relatives. In this study, we use newly available sequences to identify GATA factors across the nematode phylum. We find that most species have fewer than six GATA factors, but some species have 10 or more. Comparisons of gene and protein structure suggest that there were at most two GATA factors at the base of the phylum, which expanded by duplication and modification to result in a core set of four factors. The high degree of structural similarity with the corresponding orthologues in <i>C. elegans </i>suggests that the nematode GATA factors share similar functions in development.https://www.mdpi.com/2221-3759/8/4/27GATA factorstranscription factorsnematodes
collection DOAJ
language English
format Article
sources DOAJ
author Ethan Eurmsirilerd
Morris F. Maduro
spellingShingle Ethan Eurmsirilerd
Morris F. Maduro
Evolution of Developmental GATA Factors in Nematodes
Journal of Developmental Biology
GATA factors
transcription factors
nematodes
author_facet Ethan Eurmsirilerd
Morris F. Maduro
author_sort Ethan Eurmsirilerd
title Evolution of Developmental GATA Factors in Nematodes
title_short Evolution of Developmental GATA Factors in Nematodes
title_full Evolution of Developmental GATA Factors in Nematodes
title_fullStr Evolution of Developmental GATA Factors in Nematodes
title_full_unstemmed Evolution of Developmental GATA Factors in Nematodes
title_sort evolution of developmental gata factors in nematodes
publisher MDPI AG
series Journal of Developmental Biology
issn 2221-3759
publishDate 2020-11-01
description GATA transcription factors are found in animals, plants, and fungi. In animals, they have important developmental roles in controlling specification of cell identities and executing tissue-specific differentiation. The Phylum Nematoda is a diverse group of vermiform animals that inhabit ecological niches all over the world. Both free-living and parasitic species are known, including those that cause human infectious disease. To date, GATA factors in nematodes have been studied almost exclusively in the model system <i>C. elegans </i>and its close relatives. In this study, we use newly available sequences to identify GATA factors across the nematode phylum. We find that most species have fewer than six GATA factors, but some species have 10 or more. Comparisons of gene and protein structure suggest that there were at most two GATA factors at the base of the phylum, which expanded by duplication and modification to result in a core set of four factors. The high degree of structural similarity with the corresponding orthologues in <i>C. elegans </i>suggests that the nematode GATA factors share similar functions in development.
topic GATA factors
transcription factors
nematodes
url https://www.mdpi.com/2221-3759/8/4/27
work_keys_str_mv AT ethaneurmsirilerd evolutionofdevelopmentalgatafactorsinnematodes
AT morrisfmaduro evolutionofdevelopmentalgatafactorsinnematodes
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