Evolution of Developmental GATA Factors in Nematodes
GATA transcription factors are found in animals, plants, and fungi. In animals, they have important developmental roles in controlling specification of cell identities and executing tissue-specific differentiation. The Phylum Nematoda is a diverse group of vermiform animals that inhabit ecological n...
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doaj-ef1c282cac934186a02b37451eb871812020-11-25T04:11:11ZengMDPI AGJournal of Developmental Biology2221-37592020-11-018272710.3390/jdb8040027Evolution of Developmental GATA Factors in NematodesEthan Eurmsirilerd0Morris F. Maduro1Undergraduate Program in Biology, Department of Molecular, Cell, and Systems Biology, University of California, Riverside, Riverside, CA 92521, USADepartment of Molecular, Cell, and Systems Biology, University of California, Riverside, Riverside, CA 92521, USAGATA transcription factors are found in animals, plants, and fungi. In animals, they have important developmental roles in controlling specification of cell identities and executing tissue-specific differentiation. The Phylum Nematoda is a diverse group of vermiform animals that inhabit ecological niches all over the world. Both free-living and parasitic species are known, including those that cause human infectious disease. To date, GATA factors in nematodes have been studied almost exclusively in the model system <i>C. elegans </i>and its close relatives. In this study, we use newly available sequences to identify GATA factors across the nematode phylum. We find that most species have fewer than six GATA factors, but some species have 10 or more. Comparisons of gene and protein structure suggest that there were at most two GATA factors at the base of the phylum, which expanded by duplication and modification to result in a core set of four factors. The high degree of structural similarity with the corresponding orthologues in <i>C. elegans </i>suggests that the nematode GATA factors share similar functions in development.https://www.mdpi.com/2221-3759/8/4/27GATA factorstranscription factorsnematodes |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Ethan Eurmsirilerd Morris F. Maduro |
spellingShingle |
Ethan Eurmsirilerd Morris F. Maduro Evolution of Developmental GATA Factors in Nematodes Journal of Developmental Biology GATA factors transcription factors nematodes |
author_facet |
Ethan Eurmsirilerd Morris F. Maduro |
author_sort |
Ethan Eurmsirilerd |
title |
Evolution of Developmental GATA Factors in Nematodes |
title_short |
Evolution of Developmental GATA Factors in Nematodes |
title_full |
Evolution of Developmental GATA Factors in Nematodes |
title_fullStr |
Evolution of Developmental GATA Factors in Nematodes |
title_full_unstemmed |
Evolution of Developmental GATA Factors in Nematodes |
title_sort |
evolution of developmental gata factors in nematodes |
publisher |
MDPI AG |
series |
Journal of Developmental Biology |
issn |
2221-3759 |
publishDate |
2020-11-01 |
description |
GATA transcription factors are found in animals, plants, and fungi. In animals, they have important developmental roles in controlling specification of cell identities and executing tissue-specific differentiation. The Phylum Nematoda is a diverse group of vermiform animals that inhabit ecological niches all over the world. Both free-living and parasitic species are known, including those that cause human infectious disease. To date, GATA factors in nematodes have been studied almost exclusively in the model system <i>C. elegans </i>and its close relatives. In this study, we use newly available sequences to identify GATA factors across the nematode phylum. We find that most species have fewer than six GATA factors, but some species have 10 or more. Comparisons of gene and protein structure suggest that there were at most two GATA factors at the base of the phylum, which expanded by duplication and modification to result in a core set of four factors. The high degree of structural similarity with the corresponding orthologues in <i>C. elegans </i>suggests that the nematode GATA factors share similar functions in development. |
topic |
GATA factors transcription factors nematodes |
url |
https://www.mdpi.com/2221-3759/8/4/27 |
work_keys_str_mv |
AT ethaneurmsirilerd evolutionofdevelopmentalgatafactorsinnematodes AT morrisfmaduro evolutionofdevelopmentalgatafactorsinnematodes |
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1724418518425796608 |