Transcript Profile in Vegetable Soybean Roots Reveals Potential Gene Patterns Regulating K Uptake Efficiency

Significant differences have been reported in root K<sup>+</sup> uptake between high potassium efficiency (HKE) and low potassium efficiency (LKE) in vegetable soybean genotypes. The ideal morphological and physiological characteristics of HKE have been defined. However, the mechanism by...

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Main Authors: Changkai Liu, Bingjie Tu, Xue Wang, Yansheng Li, Qiuying Zhang, Xiaobing Liu
Format: Article
Language:English
Published: MDPI AG 2020-11-01
Series:Agronomy
Subjects:
Online Access:https://www.mdpi.com/2073-4395/10/11/1796
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spelling doaj-ee7b541375414f6cacf379c1f3d491962021-04-02T13:15:39ZengMDPI AGAgronomy2073-43952020-11-01101796179610.3390/agronomy10111796Transcript Profile in Vegetable Soybean Roots Reveals Potential Gene Patterns Regulating K Uptake EfficiencyChangkai Liu0Bingjie Tu1Xue Wang2Yansheng Li3Qiuying Zhang4Xiaobing Liu5Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, CAS, Harbin 150081, ChinaKey Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, CAS, Harbin 150081, ChinaKey Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, CAS, Harbin 150081, ChinaKey Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, CAS, Harbin 150081, ChinaInnovation Academy for Seed Design, Chinese Academy of Sciences, Harbin 150081, ChinaKey Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, CAS, Harbin 150081, ChinaSignificant differences have been reported in root K<sup>+</sup> uptake between high potassium efficiency (HKE) and low potassium efficiency (LKE) in vegetable soybean genotypes. The ideal morphological and physiological characteristics of HKE have been defined. However, the mechanism by which HKE vegetable soybean genotypes efficiently uptake K remains unclear. By using representative materials, this study investigated the responses of root development to low K (LK) stress, and identified and assessed the key genes affecting high-efficiency K uptake between HKE and LKE vegetable soybean roots. The root growth of LKE was significantly inhibited under the LK condition. Compared with LKE, HKE had more lateral roots in both LK and CK (control) conditions. Lateral root of HKE was more preferentially responsive to exogenous IAA, with a wider response threshold to IAA concentration (from 0.1 to 1 µM). Transcriptome analysis revealed that LK induced transport-related genes up-regulated in HKE compared with LKE. In HKE, homologous genes of a K channel encoding gene potassium channel AKT1 (AKT1) and a K transporter gene high-affinity K<sup>+</sup> transporter 5 (HAK5) were both highly expressed under the LK stress. Additionally, genes related to plant hormones signal transductions were also identified differentially expressed between the two genotypes. Plant hormone signaling involved in root morphological regulation pathways may play significant roles in improving the efficiency of vegetable soybean K<sup>+</sup> uptake. A diagram showing possible molecular mechanisms in regulating root high-efficiency uptake K<sup>+</sup> in vegetable soybean is proposed.https://www.mdpi.com/2073-4395/10/11/1796potassium high-efficiencyRNA-Seqroot architecturelateral rootvegetable soybean
collection DOAJ
language English
format Article
sources DOAJ
author Changkai Liu
Bingjie Tu
Xue Wang
Yansheng Li
Qiuying Zhang
Xiaobing Liu
spellingShingle Changkai Liu
Bingjie Tu
Xue Wang
Yansheng Li
Qiuying Zhang
Xiaobing Liu
Transcript Profile in Vegetable Soybean Roots Reveals Potential Gene Patterns Regulating K Uptake Efficiency
Agronomy
potassium high-efficiency
RNA-Seq
root architecture
lateral root
vegetable soybean
author_facet Changkai Liu
Bingjie Tu
Xue Wang
Yansheng Li
Qiuying Zhang
Xiaobing Liu
author_sort Changkai Liu
title Transcript Profile in Vegetable Soybean Roots Reveals Potential Gene Patterns Regulating K Uptake Efficiency
title_short Transcript Profile in Vegetable Soybean Roots Reveals Potential Gene Patterns Regulating K Uptake Efficiency
title_full Transcript Profile in Vegetable Soybean Roots Reveals Potential Gene Patterns Regulating K Uptake Efficiency
title_fullStr Transcript Profile in Vegetable Soybean Roots Reveals Potential Gene Patterns Regulating K Uptake Efficiency
title_full_unstemmed Transcript Profile in Vegetable Soybean Roots Reveals Potential Gene Patterns Regulating K Uptake Efficiency
title_sort transcript profile in vegetable soybean roots reveals potential gene patterns regulating k uptake efficiency
publisher MDPI AG
series Agronomy
issn 2073-4395
publishDate 2020-11-01
description Significant differences have been reported in root K<sup>+</sup> uptake between high potassium efficiency (HKE) and low potassium efficiency (LKE) in vegetable soybean genotypes. The ideal morphological and physiological characteristics of HKE have been defined. However, the mechanism by which HKE vegetable soybean genotypes efficiently uptake K remains unclear. By using representative materials, this study investigated the responses of root development to low K (LK) stress, and identified and assessed the key genes affecting high-efficiency K uptake between HKE and LKE vegetable soybean roots. The root growth of LKE was significantly inhibited under the LK condition. Compared with LKE, HKE had more lateral roots in both LK and CK (control) conditions. Lateral root of HKE was more preferentially responsive to exogenous IAA, with a wider response threshold to IAA concentration (from 0.1 to 1 µM). Transcriptome analysis revealed that LK induced transport-related genes up-regulated in HKE compared with LKE. In HKE, homologous genes of a K channel encoding gene potassium channel AKT1 (AKT1) and a K transporter gene high-affinity K<sup>+</sup> transporter 5 (HAK5) were both highly expressed under the LK stress. Additionally, genes related to plant hormones signal transductions were also identified differentially expressed between the two genotypes. Plant hormone signaling involved in root morphological regulation pathways may play significant roles in improving the efficiency of vegetable soybean K<sup>+</sup> uptake. A diagram showing possible molecular mechanisms in regulating root high-efficiency uptake K<sup>+</sup> in vegetable soybean is proposed.
topic potassium high-efficiency
RNA-Seq
root architecture
lateral root
vegetable soybean
url https://www.mdpi.com/2073-4395/10/11/1796
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