Sensitivity of a Satellite Algorithm for Harmful Algal Bloom Discrimination to the Use of Laboratory Bio-optical Data for Training
Early detection of dense harmful algal blooms (HABs) is possible using ocean colour remote sensing. Some algorithms require a training dataset, usually constructed from satellite images with a priori knowledge of the existence of the bloom. This approach can be limited if there is a lack of in situ...
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doaj-edd03dd912f748a7b754a60d5ffd41d22020-12-09T06:44:39ZengFrontiers Media S.A.Frontiers in Marine Science2296-77452020-12-01710.3389/fmars.2020.582960582960Sensitivity of a Satellite Algorithm for Harmful Algal Bloom Discrimination to the Use of Laboratory Bio-optical Data for TrainingVictor Martinez-Vicente0Andrey Kurekin1Carolina Sá2Vanda Brotas3Ana Amorim4Vera Veloso5Junfang Lin6Peter I. Miller7Remote Sensing Group, Plymouth Marine Laboratory, Plymouth, United KingdomRemote Sensing Group, Plymouth Marine Laboratory, Plymouth, United KingdomMARE, Centro de Ciências Do Mar e Ambiente, Faculdade de Ciências, Universidade de Lisboa, Lisbon, PortugalMARE, Centro de Ciências Do Mar e Ambiente, Faculdade de Ciências, Universidade de Lisboa, Lisbon, PortugalMARE, Centro de Ciências Do Mar e Ambiente, Faculdade de Ciências, Universidade de Lisboa, Lisbon, PortugalMARE, Centro de Ciências Do Mar e Ambiente, Faculdade de Ciências, Universidade de Lisboa, Lisbon, PortugalRemote Sensing Group, Plymouth Marine Laboratory, Plymouth, United KingdomRemote Sensing Group, Plymouth Marine Laboratory, Plymouth, United KingdomEarly detection of dense harmful algal blooms (HABs) is possible using ocean colour remote sensing. Some algorithms require a training dataset, usually constructed from satellite images with a priori knowledge of the existence of the bloom. This approach can be limited if there is a lack of in situ observations, coincident with satellite images. A laboratory experiment collected biological and bio-optical data from a culture of Karenia mikimotoi, a harmful phytoplankton dinoflagellate. These data showed characteristic signals in chlorophyll-specific absorption and backscattering coefficients. The bio-optical data from the culture and a bio-optical model were used to construct a training dataset for an existing statistical classifier. MERIS imagery over the European continental shelf were processed with the classifier using different training datasets. The differences in positive rates of detection of K. mikimotoi between using an algorithm trained with purely manually selected areas on satellite images and using laboratory data as training was overall <1%. The difference was higher, <15%, when using modeled optical data rather than laboratory data, with potential for improvement if local average chlorophyll concentrations are used. Using a laboratory-derived training dataset improved the ability of the algorithm to distinguish high turbidity from high chlorophyll concentrations. However, additional in situ observations of non-harmful high chlorophyll blooms in the area would improve testing of the ability to distinguish harmful from non-harmful high chlorophyll blooms. This approach can be expanded to use additional wavelengths, different satellite sensors and different phytoplankton genera.https://www.frontiersin.org/articles/10.3389/fmars.2020.582960/fullphytoplanktonEnglish channelMERISoptical backscatteringKarenia mikimotoiharmful algal blooms |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Victor Martinez-Vicente Andrey Kurekin Carolina Sá Vanda Brotas Ana Amorim Vera Veloso Junfang Lin Peter I. Miller |
spellingShingle |
Victor Martinez-Vicente Andrey Kurekin Carolina Sá Vanda Brotas Ana Amorim Vera Veloso Junfang Lin Peter I. Miller Sensitivity of a Satellite Algorithm for Harmful Algal Bloom Discrimination to the Use of Laboratory Bio-optical Data for Training Frontiers in Marine Science phytoplankton English channel MERIS optical backscattering Karenia mikimotoi harmful algal blooms |
author_facet |
Victor Martinez-Vicente Andrey Kurekin Carolina Sá Vanda Brotas Ana Amorim Vera Veloso Junfang Lin Peter I. Miller |
author_sort |
Victor Martinez-Vicente |
title |
Sensitivity of a Satellite Algorithm for Harmful Algal Bloom Discrimination to the Use of Laboratory Bio-optical Data for Training |
title_short |
Sensitivity of a Satellite Algorithm for Harmful Algal Bloom Discrimination to the Use of Laboratory Bio-optical Data for Training |
title_full |
Sensitivity of a Satellite Algorithm for Harmful Algal Bloom Discrimination to the Use of Laboratory Bio-optical Data for Training |
title_fullStr |
Sensitivity of a Satellite Algorithm for Harmful Algal Bloom Discrimination to the Use of Laboratory Bio-optical Data for Training |
title_full_unstemmed |
Sensitivity of a Satellite Algorithm for Harmful Algal Bloom Discrimination to the Use of Laboratory Bio-optical Data for Training |
title_sort |
sensitivity of a satellite algorithm for harmful algal bloom discrimination to the use of laboratory bio-optical data for training |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Marine Science |
issn |
2296-7745 |
publishDate |
2020-12-01 |
description |
Early detection of dense harmful algal blooms (HABs) is possible using ocean colour remote sensing. Some algorithms require a training dataset, usually constructed from satellite images with a priori knowledge of the existence of the bloom. This approach can be limited if there is a lack of in situ observations, coincident with satellite images. A laboratory experiment collected biological and bio-optical data from a culture of Karenia mikimotoi, a harmful phytoplankton dinoflagellate. These data showed characteristic signals in chlorophyll-specific absorption and backscattering coefficients. The bio-optical data from the culture and a bio-optical model were used to construct a training dataset for an existing statistical classifier. MERIS imagery over the European continental shelf were processed with the classifier using different training datasets. The differences in positive rates of detection of K. mikimotoi between using an algorithm trained with purely manually selected areas on satellite images and using laboratory data as training was overall <1%. The difference was higher, <15%, when using modeled optical data rather than laboratory data, with potential for improvement if local average chlorophyll concentrations are used. Using a laboratory-derived training dataset improved the ability of the algorithm to distinguish high turbidity from high chlorophyll concentrations. However, additional in situ observations of non-harmful high chlorophyll blooms in the area would improve testing of the ability to distinguish harmful from non-harmful high chlorophyll blooms. This approach can be expanded to use additional wavelengths, different satellite sensors and different phytoplankton genera. |
topic |
phytoplankton English channel MERIS optical backscattering Karenia mikimotoi harmful algal blooms |
url |
https://www.frontiersin.org/articles/10.3389/fmars.2020.582960/full |
work_keys_str_mv |
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