Automatic classification of focal liver lesions based on MRI and risk factors.

<h4>Objectives</h4>Accurate classification of focal liver lesions is an important part of liver disease diagnostics. In clinical practice, the lesion type is often determined from the abdominal MR examination, which includes T2-weighted and dynamic contrast enhanced (DCE) MR images. To d...

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Main Authors: Mariëlle J A Jansen, Hugo J Kuijf, Wouter B Veldhuis, Frank J Wessels, Max A Viergever, Josien P W Pluim
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0217053
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spelling doaj-edb2aece7e904121a6ffadadbca339a62021-03-04T10:30:53ZengPublic Library of Science (PLoS)PLoS ONE1932-62032019-01-01145e021705310.1371/journal.pone.0217053Automatic classification of focal liver lesions based on MRI and risk factors.Mariëlle J A JansenHugo J KuijfWouter B VeldhuisFrank J WesselsMax A ViergeverJosien P W Pluim<h4>Objectives</h4>Accurate classification of focal liver lesions is an important part of liver disease diagnostics. In clinical practice, the lesion type is often determined from the abdominal MR examination, which includes T2-weighted and dynamic contrast enhanced (DCE) MR images. To date, only T2-weighted images are exploited for automatic classification of focal liver lesions. In this study additional MR sequences and risk factors are used for automatic classification to improve the results and to make a step forward to a clinically useful aid for radiologists.<h4>Materials and methods</h4>Clinical MRI data sets of 95 patients with in total 125 benign lesions (40 adenomas, 29 cysts and 56 hemangiomas) and 88 malignant lesions (30 hepatocellular carcinomas (HCC) and 58 metastases) were included in this study. Contrast curve, gray level histogram, and gray level co-occurrence matrix texture features were extracted from the DCE-MR and T2-weighted images. In addition, risk factors including the presence of steatosis, cirrhosis, and a known primary tumor were used as features. Fifty features with the highest ANOVA F-score were selected and fed to an extremely randomized trees classifier. The classifier evaluation was performed using the leave-one-out principle and receiver operating characteristic (ROC) curve analysis.<h4>Results</h4>The overall accuracy for the classification of the five major focal liver lesion types is 0.77. The sensitivity/specificity is 0.80/0.78, 0.93/0.93, 0.84/0.82, 0.73/0.56, and 0.62/0.77 for adenoma, cyst, hemangioma, HCC, and metastasis, respectively.<h4>Conclusion</h4>The proposed classification system using features derived from clinical DCE-MR and T2-weighted images, with additional risk factors is able to differentiate five common types of lesions and is a step forward to a clinically useful aid for focal liver lesion diagnosis.https://doi.org/10.1371/journal.pone.0217053
collection DOAJ
language English
format Article
sources DOAJ
author Mariëlle J A Jansen
Hugo J Kuijf
Wouter B Veldhuis
Frank J Wessels
Max A Viergever
Josien P W Pluim
spellingShingle Mariëlle J A Jansen
Hugo J Kuijf
Wouter B Veldhuis
Frank J Wessels
Max A Viergever
Josien P W Pluim
Automatic classification of focal liver lesions based on MRI and risk factors.
PLoS ONE
author_facet Mariëlle J A Jansen
Hugo J Kuijf
Wouter B Veldhuis
Frank J Wessels
Max A Viergever
Josien P W Pluim
author_sort Mariëlle J A Jansen
title Automatic classification of focal liver lesions based on MRI and risk factors.
title_short Automatic classification of focal liver lesions based on MRI and risk factors.
title_full Automatic classification of focal liver lesions based on MRI and risk factors.
title_fullStr Automatic classification of focal liver lesions based on MRI and risk factors.
title_full_unstemmed Automatic classification of focal liver lesions based on MRI and risk factors.
title_sort automatic classification of focal liver lesions based on mri and risk factors.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2019-01-01
description <h4>Objectives</h4>Accurate classification of focal liver lesions is an important part of liver disease diagnostics. In clinical practice, the lesion type is often determined from the abdominal MR examination, which includes T2-weighted and dynamic contrast enhanced (DCE) MR images. To date, only T2-weighted images are exploited for automatic classification of focal liver lesions. In this study additional MR sequences and risk factors are used for automatic classification to improve the results and to make a step forward to a clinically useful aid for radiologists.<h4>Materials and methods</h4>Clinical MRI data sets of 95 patients with in total 125 benign lesions (40 adenomas, 29 cysts and 56 hemangiomas) and 88 malignant lesions (30 hepatocellular carcinomas (HCC) and 58 metastases) were included in this study. Contrast curve, gray level histogram, and gray level co-occurrence matrix texture features were extracted from the DCE-MR and T2-weighted images. In addition, risk factors including the presence of steatosis, cirrhosis, and a known primary tumor were used as features. Fifty features with the highest ANOVA F-score were selected and fed to an extremely randomized trees classifier. The classifier evaluation was performed using the leave-one-out principle and receiver operating characteristic (ROC) curve analysis.<h4>Results</h4>The overall accuracy for the classification of the five major focal liver lesion types is 0.77. The sensitivity/specificity is 0.80/0.78, 0.93/0.93, 0.84/0.82, 0.73/0.56, and 0.62/0.77 for adenoma, cyst, hemangioma, HCC, and metastasis, respectively.<h4>Conclusion</h4>The proposed classification system using features derived from clinical DCE-MR and T2-weighted images, with additional risk factors is able to differentiate five common types of lesions and is a step forward to a clinically useful aid for focal liver lesion diagnosis.
url https://doi.org/10.1371/journal.pone.0217053
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