Association of Tag SNPs and Rare CNVs of the MIR155HG/miR-155 Gene with Epilepsy in the Chinese Han Population
Background. miR-155 likely acts as an important modulator in the inflammatory mechanism of epilepsy, and this study investigated its association with epilepsy from the perspective of molecular genetics. Methods. This study enrolled 249 epileptic patients and 289 healthy individuals of the Chinese Ha...
Main Authors: | , , , , , , , , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Hindawi Limited
2015-01-01
|
Series: | BioMed Research International |
Online Access: | http://dx.doi.org/10.1155/2015/837213 |
id |
doaj-ed6991330b1846a28fbe42dee3d39f3a |
---|---|
record_format |
Article |
spelling |
doaj-ed6991330b1846a28fbe42dee3d39f3a2020-11-24T23:09:46ZengHindawi LimitedBioMed Research International2314-61332314-61412015-01-01201510.1155/2015/837213837213Association of Tag SNPs and Rare CNVs of the MIR155HG/miR-155 Gene with Epilepsy in the Chinese Han PopulationHua Tao0Lili Cui1You Li2Xu Zhou3Guoda Ma4Lifen Yao5Jiawu Fu6Wen Li7Yujie Cai8Haihong Zhou9Wangtao Zhong10Shuyan Zhang11Zhien Xu12Keshen Li13Bin Zhao14Department of Neurology, Affiliated Hospital of Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaInstitute of Neurology, Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaInstitute of Neurology, Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaClinical Research Center, Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaInstitute of Neurology, Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaDepartment of Neurology, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang 150001, ChinaDepartment of Neurology, Affiliated Hospital of Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaInstitute of Neurology, Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaInstitute of Neurology, Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaDepartment of Neurology, Affiliated Hospital of Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaDepartment of Neurology, Affiliated Hospital of Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaDepartment of Neurology, The Fourth Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang 150001, ChinaDepartment of Neurology, Affiliated Hospital of Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaInstitute of Neurology, Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaDepartment of Neurology, Affiliated Hospital of Guangdong Medical College, Zhanjiang, Guangdong 524001, ChinaBackground. miR-155 likely acts as an important modulator in the inflammatory mechanism of epilepsy, and this study investigated its association with epilepsy from the perspective of molecular genetics. Methods. This study enrolled 249 epileptic patients and 289 healthy individuals of the Chinese Han population; 4 tag single-nucleotide polymorphisms (SNPs: rs969885, rs12483428, rs987195, and rs4817027) of the MIR155HG/miR-155 gene were selected, and their association with epilepsy was investigated. Additionally, this study determined the copy numbers of the MIR155HG/miR-155 gene. Results. The TCA haplotype (rs12483428-rs987195-rs4817027) and the AA genotype at rs4817027 conferred higher vulnerability to epilepsy in males. Stratification by age of onset revealed that the CC haplotype (rs969885-rs987195) was a genetic susceptibility factor for early-onset epilepsy. Further stratification by drug-resistant status indicated the CC haplotype (rs969885-rs987195) and the AA genotype at rs4817027 were genetic susceptibility factors for drug-resistant epilepsy (DRE) but the CG haplotype (rs987195-rs969885) was a genetically protective factor against DRE. Besides, 3 epileptic patients with copy number variants of the MIR155HG/miR-155 gene were observed. Conclusions. This study first demonstrates the association of MIR155HG/miR-155 tag SNPs with epilepsy and shows that rare CNVs were found exclusively in epileptic patients, clarifying the genetic role of miR-155 in epilepsy.http://dx.doi.org/10.1155/2015/837213 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Hua Tao Lili Cui You Li Xu Zhou Guoda Ma Lifen Yao Jiawu Fu Wen Li Yujie Cai Haihong Zhou Wangtao Zhong Shuyan Zhang Zhien Xu Keshen Li Bin Zhao |
spellingShingle |
Hua Tao Lili Cui You Li Xu Zhou Guoda Ma Lifen Yao Jiawu Fu Wen Li Yujie Cai Haihong Zhou Wangtao Zhong Shuyan Zhang Zhien Xu Keshen Li Bin Zhao Association of Tag SNPs and Rare CNVs of the MIR155HG/miR-155 Gene with Epilepsy in the Chinese Han Population BioMed Research International |
author_facet |
Hua Tao Lili Cui You Li Xu Zhou Guoda Ma Lifen Yao Jiawu Fu Wen Li Yujie Cai Haihong Zhou Wangtao Zhong Shuyan Zhang Zhien Xu Keshen Li Bin Zhao |
author_sort |
Hua Tao |
title |
Association of Tag SNPs and Rare CNVs of the MIR155HG/miR-155 Gene with Epilepsy in the Chinese Han Population |
title_short |
Association of Tag SNPs and Rare CNVs of the MIR155HG/miR-155 Gene with Epilepsy in the Chinese Han Population |
title_full |
Association of Tag SNPs and Rare CNVs of the MIR155HG/miR-155 Gene with Epilepsy in the Chinese Han Population |
title_fullStr |
Association of Tag SNPs and Rare CNVs of the MIR155HG/miR-155 Gene with Epilepsy in the Chinese Han Population |
title_full_unstemmed |
Association of Tag SNPs and Rare CNVs of the MIR155HG/miR-155 Gene with Epilepsy in the Chinese Han Population |
title_sort |
association of tag snps and rare cnvs of the mir155hg/mir-155 gene with epilepsy in the chinese han population |
publisher |
Hindawi Limited |
series |
BioMed Research International |
issn |
2314-6133 2314-6141 |
publishDate |
2015-01-01 |
description |
Background. miR-155 likely acts as an important modulator in the inflammatory mechanism of epilepsy, and this study investigated its association with epilepsy from the perspective of molecular genetics. Methods. This study enrolled 249 epileptic patients and 289 healthy individuals of the Chinese Han population; 4 tag single-nucleotide polymorphisms (SNPs: rs969885, rs12483428, rs987195, and rs4817027) of the MIR155HG/miR-155 gene were selected, and their association with epilepsy was investigated. Additionally, this study determined the copy numbers of the MIR155HG/miR-155 gene. Results. The TCA haplotype (rs12483428-rs987195-rs4817027) and the AA genotype at rs4817027 conferred higher vulnerability to epilepsy in males. Stratification by age of onset revealed that the CC haplotype (rs969885-rs987195) was a genetic susceptibility factor for early-onset epilepsy. Further stratification by drug-resistant status indicated the CC haplotype (rs969885-rs987195) and the AA genotype at rs4817027 were genetic susceptibility factors for drug-resistant epilepsy (DRE) but the CG haplotype (rs987195-rs969885) was a genetically protective factor against DRE. Besides, 3 epileptic patients with copy number variants of the MIR155HG/miR-155 gene were observed. Conclusions. This study first demonstrates the association of MIR155HG/miR-155 tag SNPs with epilepsy and shows that rare CNVs were found exclusively in epileptic patients, clarifying the genetic role of miR-155 in epilepsy. |
url |
http://dx.doi.org/10.1155/2015/837213 |
work_keys_str_mv |
AT huatao associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT lilicui associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT youli associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT xuzhou associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT guodama associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT lifenyao associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT jiawufu associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT wenli associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT yujiecai associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT haihongzhou associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT wangtaozhong associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT shuyanzhang associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT zhienxu associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT keshenli associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation AT binzhao associationoftagsnpsandrarecnvsofthemir155hgmir155genewithepilepsyinthechinesehanpopulation |
_version_ |
1725609516367609856 |