Serum MicroRNA Profiling and Bioinformatics of Patients with Spleen-Deficiency Syndrome

To investigate serum microRNA (miRNA) profile and bioinformatics of patients with spleen-deficiency syndrome (SDS) and explore pathogenesis of SDS patients from miRNA levels, 10 patients with type 2 diabetes mellitus (T2DM), within which 5 patients were with SDS and the remaining were with blood sta...

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Main Authors: Ze-Min Yang, Long-Hui Chen, Min Hong, Ying-Yu Chen, Xiao-Rong Yang, Si-Meng Tang, Qian-Fa Yuan, Zhen-Yu He, Wei-Wen Chen
Format: Article
Language:English
Published: Hindawi Limited 2016-01-01
Series:Evidence-Based Complementary and Alternative Medicine
Online Access:http://dx.doi.org/10.1155/2016/8726720
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spelling doaj-ed36ade3c16b4b518ca57bc7962675782020-11-25T01:17:21ZengHindawi LimitedEvidence-Based Complementary and Alternative Medicine1741-427X1741-42882016-01-01201610.1155/2016/87267208726720Serum MicroRNA Profiling and Bioinformatics of Patients with Spleen-Deficiency SyndromeZe-Min Yang0Long-Hui Chen1Min Hong2Ying-Yu Chen3Xiao-Rong Yang4Si-Meng Tang5Qian-Fa Yuan6Zhen-Yu He7Wei-Wen Chen8School of Basic Courses, Guangdong Pharmaceutical University, No. 280 Waihuan Road East, Higher Education Mega Center, Panyu District, Guangzhou 510006, ChinaPi-Wei Institute, Guangzhou University of Chinese Medicine, No. 12 Jichang Road, Baiyun District, Guangzhou 510405, ChinaDepartment of Traditional Chinese Medicine, First Affiliated Hospital of Guangdong Pharmaceutical University, No. 19 Nonglinxia Road, Guangzhou 510080, ChinaDepartment of Traditional Chinese Medicine, First Affiliated Hospital of Guangdong Pharmaceutical University, No. 19 Nonglinxia Road, Guangzhou 510080, ChinaClinical Laboratory, First Affiliated Hospital of Guangdong Pharmaceutical University, No. 19 Nonglinxia Road, Guangzhou 510080, ChinaSchool of Basic Courses, Guangdong Pharmaceutical University, No. 280 Waihuan Road East, Higher Education Mega Center, Panyu District, Guangzhou 510006, ChinaSchool of Basic Courses, Guangdong Pharmaceutical University, No. 280 Waihuan Road East, Higher Education Mega Center, Panyu District, Guangzhou 510006, ChinaSchool of Basic Courses, Guangdong Pharmaceutical University, No. 280 Waihuan Road East, Higher Education Mega Center, Panyu District, Guangzhou 510006, ChinaPi-Wei Institute, Guangzhou University of Chinese Medicine, No. 12 Jichang Road, Baiyun District, Guangzhou 510405, ChinaTo investigate serum microRNA (miRNA) profile and bioinformatics of patients with spleen-deficiency syndrome (SDS) and explore pathogenesis of SDS patients from miRNA levels, 10 patients with type 2 diabetes mellitus (T2DM), within which 5 patients were with SDS and the remaining were with blood stasis syndrome (BSS), and 5 healthy volunteers were recruited. Serum miRNA profiles of SDS patients were identified by quantitative PCR array. Target prediction and functional annotation for miRNAs were performed by miRSystem database. The present study identified 11 candidate serum miRNAs for SDS patients, and their targets were significantly enriched in 18 KEGG pathways and 7 GO molecular functions. Those enriched KEGG pathways included (1) metabolisms of carbohydrate, protein, amino acid, and fatty acid, (2) signaling pathways of insulin, ErbB, chemokine, calcium, and type II diabetes mellitus, (3) invasions of bacterium, Escherichia coli, and Shigella (Shigellosis), and (4) endocytosis and phagocytosis. Those enriched GO molecular functions were mainly involved in transcription regulation and regulation of metabolism. Our findings might elucidate the pathogenesis of SDS patients with disorders of substance metabolism and hypoimmunity from miRNA levels, as well as providing some miRNA biomarkers for clinical syndrome differentiation of SDS.http://dx.doi.org/10.1155/2016/8726720
collection DOAJ
language English
format Article
sources DOAJ
author Ze-Min Yang
Long-Hui Chen
Min Hong
Ying-Yu Chen
Xiao-Rong Yang
Si-Meng Tang
Qian-Fa Yuan
Zhen-Yu He
Wei-Wen Chen
spellingShingle Ze-Min Yang
Long-Hui Chen
Min Hong
Ying-Yu Chen
Xiao-Rong Yang
Si-Meng Tang
Qian-Fa Yuan
Zhen-Yu He
Wei-Wen Chen
Serum MicroRNA Profiling and Bioinformatics of Patients with Spleen-Deficiency Syndrome
Evidence-Based Complementary and Alternative Medicine
author_facet Ze-Min Yang
Long-Hui Chen
Min Hong
Ying-Yu Chen
Xiao-Rong Yang
Si-Meng Tang
Qian-Fa Yuan
Zhen-Yu He
Wei-Wen Chen
author_sort Ze-Min Yang
title Serum MicroRNA Profiling and Bioinformatics of Patients with Spleen-Deficiency Syndrome
title_short Serum MicroRNA Profiling and Bioinformatics of Patients with Spleen-Deficiency Syndrome
title_full Serum MicroRNA Profiling and Bioinformatics of Patients with Spleen-Deficiency Syndrome
title_fullStr Serum MicroRNA Profiling and Bioinformatics of Patients with Spleen-Deficiency Syndrome
title_full_unstemmed Serum MicroRNA Profiling and Bioinformatics of Patients with Spleen-Deficiency Syndrome
title_sort serum microrna profiling and bioinformatics of patients with spleen-deficiency syndrome
publisher Hindawi Limited
series Evidence-Based Complementary and Alternative Medicine
issn 1741-427X
1741-4288
publishDate 2016-01-01
description To investigate serum microRNA (miRNA) profile and bioinformatics of patients with spleen-deficiency syndrome (SDS) and explore pathogenesis of SDS patients from miRNA levels, 10 patients with type 2 diabetes mellitus (T2DM), within which 5 patients were with SDS and the remaining were with blood stasis syndrome (BSS), and 5 healthy volunteers were recruited. Serum miRNA profiles of SDS patients were identified by quantitative PCR array. Target prediction and functional annotation for miRNAs were performed by miRSystem database. The present study identified 11 candidate serum miRNAs for SDS patients, and their targets were significantly enriched in 18 KEGG pathways and 7 GO molecular functions. Those enriched KEGG pathways included (1) metabolisms of carbohydrate, protein, amino acid, and fatty acid, (2) signaling pathways of insulin, ErbB, chemokine, calcium, and type II diabetes mellitus, (3) invasions of bacterium, Escherichia coli, and Shigella (Shigellosis), and (4) endocytosis and phagocytosis. Those enriched GO molecular functions were mainly involved in transcription regulation and regulation of metabolism. Our findings might elucidate the pathogenesis of SDS patients with disorders of substance metabolism and hypoimmunity from miRNA levels, as well as providing some miRNA biomarkers for clinical syndrome differentiation of SDS.
url http://dx.doi.org/10.1155/2016/8726720
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