Protein dataset of immortalized keratinocyte HaCaT cells and normal human keratinocytes

Learning of the molecular mechanisms of the pathological processes development in the normal human keratinocytes (NHK) are difficult. Immortalized keratinocytes HaCaT are often used as an analogue of NHK since they have a number of advantages over the latter - they do not require the presence of gro...

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Main Authors: A.L. Rusanov, D.D. Romashin, V.G. Zgoda, T.V. Butkova, N.G. Luzgina
Format: Article
Language:English
Published: Elsevier 2021-04-01
Series:Data in Brief
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2352340921001554
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spelling doaj-ebcfd48c91d84c25b6239b3eeb973dc42021-04-26T05:56:28ZengElsevierData in Brief2352-34092021-04-0135106871Protein dataset of immortalized keratinocyte HaCaT cells and normal human keratinocytesA.L. Rusanov0D.D. Romashin1V.G. Zgoda2T.V. Butkova3N.G. Luzgina4V. N. Orekhovich Institute of Biomedical Chemistry, Russian FederationV. N. Orekhovich Institute of Biomedical Chemistry, Russian FederationV. N. Orekhovich Institute of Biomedical Chemistry, Russian FederationCorresponding author.; V. N. Orekhovich Institute of Biomedical Chemistry, Russian FederationV. N. Orekhovich Institute of Biomedical Chemistry, Russian FederationLearning of the molecular mechanisms of the pathological processes development in the normal human keratinocytes (NHK) are difficult. Immortalized keratinocytes HaCaT are often used as an analogue of NHK since they have a number of advantages over the latter - they do not require the presence of growth and differentiation factors in the medium, have unlimited potential for proliferation, demonstrate stable phenotype regardless of the number of passages [1]. Taking into account the properties and characteristics of the HaCaT line, these cells can be considered as a promising experimental model for research of various physiological processes occurring in human keratinocytes. However, to understand the limitations of such an experimental model, a detailed comparative characterization of HaCaT and NHK is required, which can be obtained by carrying out its proteomic analysis.In this article we present datasets obtained through the high-throughput shotgun proteomics analysis of normal human keratinocytes and immortalized HaCaT keratinocytes.As a protocol for proteomic profiling of cells, we used the approach of obtaining LC-MS / MS measurements followed by their processing with Progenesis LC-MS software (Nonlinear Dynamics Ltd.). The mzML files were deposited to the Mendeley Data.http://www.sciencedirect.com/science/article/pii/S2352340921001554Normal human keratinocytesKeratinocytes HaCaTProteomic analysisExperimental model
collection DOAJ
language English
format Article
sources DOAJ
author A.L. Rusanov
D.D. Romashin
V.G. Zgoda
T.V. Butkova
N.G. Luzgina
spellingShingle A.L. Rusanov
D.D. Romashin
V.G. Zgoda
T.V. Butkova
N.G. Luzgina
Protein dataset of immortalized keratinocyte HaCaT cells and normal human keratinocytes
Data in Brief
Normal human keratinocytes
Keratinocytes HaCaT
Proteomic analysis
Experimental model
author_facet A.L. Rusanov
D.D. Romashin
V.G. Zgoda
T.V. Butkova
N.G. Luzgina
author_sort A.L. Rusanov
title Protein dataset of immortalized keratinocyte HaCaT cells and normal human keratinocytes
title_short Protein dataset of immortalized keratinocyte HaCaT cells and normal human keratinocytes
title_full Protein dataset of immortalized keratinocyte HaCaT cells and normal human keratinocytes
title_fullStr Protein dataset of immortalized keratinocyte HaCaT cells and normal human keratinocytes
title_full_unstemmed Protein dataset of immortalized keratinocyte HaCaT cells and normal human keratinocytes
title_sort protein dataset of immortalized keratinocyte hacat cells and normal human keratinocytes
publisher Elsevier
series Data in Brief
issn 2352-3409
publishDate 2021-04-01
description Learning of the molecular mechanisms of the pathological processes development in the normal human keratinocytes (NHK) are difficult. Immortalized keratinocytes HaCaT are often used as an analogue of NHK since they have a number of advantages over the latter - they do not require the presence of growth and differentiation factors in the medium, have unlimited potential for proliferation, demonstrate stable phenotype regardless of the number of passages [1]. Taking into account the properties and characteristics of the HaCaT line, these cells can be considered as a promising experimental model for research of various physiological processes occurring in human keratinocytes. However, to understand the limitations of such an experimental model, a detailed comparative characterization of HaCaT and NHK is required, which can be obtained by carrying out its proteomic analysis.In this article we present datasets obtained through the high-throughput shotgun proteomics analysis of normal human keratinocytes and immortalized HaCaT keratinocytes.As a protocol for proteomic profiling of cells, we used the approach of obtaining LC-MS / MS measurements followed by their processing with Progenesis LC-MS software (Nonlinear Dynamics Ltd.). The mzML files were deposited to the Mendeley Data.
topic Normal human keratinocytes
Keratinocytes HaCaT
Proteomic analysis
Experimental model
url http://www.sciencedirect.com/science/article/pii/S2352340921001554
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