Comparative Mitogenomic Analysis of Two Longhorn Beetles (Coleoptera: Cerambycidae: Lamiinae) with Preliminary Investigation into Phylogenetic Relationships of Tribes of Lamiinae

The subfamily Lamiinae is the most taxonomically diverse subfamily of Cerambycidae, but relationships between tribes of Lamiinae are still unresolved. In order to study the characteristics of the mitogenomes of Lamiinae and the tribal-level phylogenetic relationships, we sequenced the mitogenomes of...

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Main Authors: Yifang Ren, Huanhuan Lu, Longyan Chen, Simone Sabatelli, Chaojie Wang, Guanglin Xie, Ping Wang, Meike Liu, Wenkai Wang, Paolo Audisio
Format: Article
Language:English
Published: MDPI AG 2021-09-01
Series:Insects
Subjects:
Online Access:https://www.mdpi.com/2075-4450/12/9/820
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spelling doaj-ea89f179d521457494d970dc42cb270e2021-09-26T00:27:02ZengMDPI AGInsects2075-44502021-09-011282082010.3390/insects12090820Comparative Mitogenomic Analysis of Two Longhorn Beetles (Coleoptera: Cerambycidae: Lamiinae) with Preliminary Investigation into Phylogenetic Relationships of Tribes of LamiinaeYifang Ren0Huanhuan Lu1Longyan Chen2Simone Sabatelli3Chaojie Wang4Guanglin Xie5Ping Wang6Meike Liu7Wenkai Wang8Paolo Audisio9Institute of Entomology, College of Agriculture, Yangtze University, Jingzhou 434025, ChinaChongqing Key Laboratory of Vector Insects, College of Life Sciences, Chongqing Normal University, Chongqing 401331, ChinaInstitute of Entomology, College of Agriculture, Yangtze University, Jingzhou 434025, ChinaDipartimento di Biologia e Biotecnologie “Charles Darwin”, Sapienza Università di Roma, Viale dell’Università 32, I-00185 Rome, ItalyInstitute of Entomology, College of Agriculture, Yangtze University, Jingzhou 434025, ChinaInstitute of Entomology, College of Agriculture, Yangtze University, Jingzhou 434025, ChinaInstitute of Entomology, College of Agriculture, Yangtze University, Jingzhou 434025, ChinaInstitute of Entomology, College of Agriculture, Yangtze University, Jingzhou 434025, ChinaInstitute of Entomology, College of Agriculture, Yangtze University, Jingzhou 434025, ChinaDipartimento di Biologia e Biotecnologie “Charles Darwin”, Sapienza Università di Roma, Viale dell’Università 32, I-00185 Rome, ItalyThe subfamily Lamiinae is the most taxonomically diverse subfamily of Cerambycidae, but relationships between tribes of Lamiinae are still unresolved. In order to study the characteristics of the mitogenomes of Lamiinae and the tribal-level phylogenetic relationships, we sequenced the mitogenomes of two species representing two tribes, <i>Agapanthia amurensis</i> (Agapanthiini) and <i>Moechotypa diphysis</i> (Ceroplesini), with a total length of 15,512 bp and 15,493 bp, respectively. The gene arrangements of these two new mitogenomes were consistent with the inferred ancestral insect mitogenomes. Each species contained 37 typical mitochondrial genes and a control region (A + T-rich region), including 13 protein-coding genes (<i>PCGs</i>), 22 transfer RNA genes (tRNAs), and two ribosomal RNA genes (rRNAs). All <i>PCGs</i> initiated with the standard start codon ATN, and terminated with the complete stop codons of TAA and TAG, or incomplete stop codon T. All tRNAs could be folded into a clover-leaf secondary structure except for <i>trnS1</i>, in which the dihydrouridine (DHU) arm was reduced. Moreover, we studied the phylogenetic relationships between some tribes of Lamiinae based in mitochondrial <i>PCGs</i> in nucleotides; our results show that the relationships were as follows: (Onciderini + ((Apomecynini + Acanthocinini) + ((Ceroplesini + Agapanthiini) + ((Mesosini + Pteropliini) + ((Dorcaschematini + (Saperdini 1 + (Phytoeciini + Saperdini 2))) + (Batocerini + Lamiini)))))).https://www.mdpi.com/2075-4450/12/9/820molecularmitochondrial genomegenome structurephylogenetic analysis
collection DOAJ
language English
format Article
sources DOAJ
author Yifang Ren
Huanhuan Lu
Longyan Chen
Simone Sabatelli
Chaojie Wang
Guanglin Xie
Ping Wang
Meike Liu
Wenkai Wang
Paolo Audisio
spellingShingle Yifang Ren
Huanhuan Lu
Longyan Chen
Simone Sabatelli
Chaojie Wang
Guanglin Xie
Ping Wang
Meike Liu
Wenkai Wang
Paolo Audisio
Comparative Mitogenomic Analysis of Two Longhorn Beetles (Coleoptera: Cerambycidae: Lamiinae) with Preliminary Investigation into Phylogenetic Relationships of Tribes of Lamiinae
Insects
molecular
mitochondrial genome
genome structure
phylogenetic analysis
author_facet Yifang Ren
Huanhuan Lu
Longyan Chen
Simone Sabatelli
Chaojie Wang
Guanglin Xie
Ping Wang
Meike Liu
Wenkai Wang
Paolo Audisio
author_sort Yifang Ren
title Comparative Mitogenomic Analysis of Two Longhorn Beetles (Coleoptera: Cerambycidae: Lamiinae) with Preliminary Investigation into Phylogenetic Relationships of Tribes of Lamiinae
title_short Comparative Mitogenomic Analysis of Two Longhorn Beetles (Coleoptera: Cerambycidae: Lamiinae) with Preliminary Investigation into Phylogenetic Relationships of Tribes of Lamiinae
title_full Comparative Mitogenomic Analysis of Two Longhorn Beetles (Coleoptera: Cerambycidae: Lamiinae) with Preliminary Investigation into Phylogenetic Relationships of Tribes of Lamiinae
title_fullStr Comparative Mitogenomic Analysis of Two Longhorn Beetles (Coleoptera: Cerambycidae: Lamiinae) with Preliminary Investigation into Phylogenetic Relationships of Tribes of Lamiinae
title_full_unstemmed Comparative Mitogenomic Analysis of Two Longhorn Beetles (Coleoptera: Cerambycidae: Lamiinae) with Preliminary Investigation into Phylogenetic Relationships of Tribes of Lamiinae
title_sort comparative mitogenomic analysis of two longhorn beetles (coleoptera: cerambycidae: lamiinae) with preliminary investigation into phylogenetic relationships of tribes of lamiinae
publisher MDPI AG
series Insects
issn 2075-4450
publishDate 2021-09-01
description The subfamily Lamiinae is the most taxonomically diverse subfamily of Cerambycidae, but relationships between tribes of Lamiinae are still unresolved. In order to study the characteristics of the mitogenomes of Lamiinae and the tribal-level phylogenetic relationships, we sequenced the mitogenomes of two species representing two tribes, <i>Agapanthia amurensis</i> (Agapanthiini) and <i>Moechotypa diphysis</i> (Ceroplesini), with a total length of 15,512 bp and 15,493 bp, respectively. The gene arrangements of these two new mitogenomes were consistent with the inferred ancestral insect mitogenomes. Each species contained 37 typical mitochondrial genes and a control region (A + T-rich region), including 13 protein-coding genes (<i>PCGs</i>), 22 transfer RNA genes (tRNAs), and two ribosomal RNA genes (rRNAs). All <i>PCGs</i> initiated with the standard start codon ATN, and terminated with the complete stop codons of TAA and TAG, or incomplete stop codon T. All tRNAs could be folded into a clover-leaf secondary structure except for <i>trnS1</i>, in which the dihydrouridine (DHU) arm was reduced. Moreover, we studied the phylogenetic relationships between some tribes of Lamiinae based in mitochondrial <i>PCGs</i> in nucleotides; our results show that the relationships were as follows: (Onciderini + ((Apomecynini + Acanthocinini) + ((Ceroplesini + Agapanthiini) + ((Mesosini + Pteropliini) + ((Dorcaschematini + (Saperdini 1 + (Phytoeciini + Saperdini 2))) + (Batocerini + Lamiini)))))).
topic molecular
mitochondrial genome
genome structure
phylogenetic analysis
url https://www.mdpi.com/2075-4450/12/9/820
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