Comparative transcriptomics in Syllidae (Annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct process

Abstract Background Annelids exhibit remarkable postembryonic developmental abilities. Most annelids grow during their whole life by adding segments through the action of a segment addition zone (SAZ) located in front of the pygidium. In addition, they show an outstanding ability to regenerate their...

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Main Authors: Rannyele Passos Ribeiro, Guillermo Ponz-Segrelles, Christoph Bleidorn, Maria Teresa Aguado
Format: Article
Language:English
Published: BMC 2019-11-01
Series:BMC Genomics
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12864-019-6223-y
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spelling doaj-e94f2bd67fca4d9ba209b82be2ba0adb2020-11-25T04:08:41ZengBMCBMC Genomics1471-21642019-11-0120111310.1186/s12864-019-6223-yComparative transcriptomics in Syllidae (Annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct processRannyele Passos Ribeiro0Guillermo Ponz-Segrelles1Christoph Bleidorn2Maria Teresa Aguado3Departamento de Biología, Facultad de Ciencias, Universidad Autónoma de MadridDepartamento de Biología, Facultad de Ciencias, Universidad Autónoma de MadridAnimal Evolution & Biodiversity, Georg-August-Universität GöttingenDepartamento de Biología, Facultad de Ciencias, Universidad Autónoma de MadridAbstract Background Annelids exhibit remarkable postembryonic developmental abilities. Most annelids grow during their whole life by adding segments through the action of a segment addition zone (SAZ) located in front of the pygidium. In addition, they show an outstanding ability to regenerate their bodies. Experimental evidence and field observations show that many annelids are able to regenerate their posterior bodies, while anterior regeneration is often limited or absent. Syllidae, for instance, usually show high abilities of posterior regeneration, although anterior regeneration varies across species. Some syllids are able to partially restore the anterior end, while others regenerate all lost anterior body after bisection. Here, we used comparative transcriptomics to detect changes in the gene expression profiles during anterior regeneration, posterior regeneration and regular growth of two syllid species: Sphaerosyllis hystrix and Syllis gracilis; which exhibit limited and complete anterior regeneration, respectively. Results We detected a high number of genes with differential expression: 4771 genes in S. hystrix (limited anterior regeneration) and 1997 genes in S. gracilis (complete anterior regeneration). For both species, the comparative transcriptomic analysis showed that gene expression during posterior regeneration and regular growth was very similar, whereas anterior regeneration was characterized by up-regulation of several genes. Among the up-regulated genes, we identified putative homologs of regeneration-related genes associated to cellular proliferation, nervous system development, establishment of body axis, and stem-cellness; such as rup and JNK (in S. hystrix); and glutamine synthetase, elav, slit, Hox genes, β-catenin and PL10 (in S. gracilis). Conclusions Posterior regeneration and regular growth show no significant differences in gene expression in the herein investigated syllids. However, anterior regeneration is associated with a clear change in terms of gene expression in both species. Our comparative transcriptomic analysis was able to detect differential expression of some regeneration-related genes, suggesting that syllids share some features of the regenerative mechanisms already known for other annelids and invertebrates.http://link.springer.com/article/10.1186/s12864-019-6223-yRegenerationAnnelidaSyllidaeRNA-seqTranscriptomeHox genes
collection DOAJ
language English
format Article
sources DOAJ
author Rannyele Passos Ribeiro
Guillermo Ponz-Segrelles
Christoph Bleidorn
Maria Teresa Aguado
spellingShingle Rannyele Passos Ribeiro
Guillermo Ponz-Segrelles
Christoph Bleidorn
Maria Teresa Aguado
Comparative transcriptomics in Syllidae (Annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct process
BMC Genomics
Regeneration
Annelida
Syllidae
RNA-seq
Transcriptome
Hox genes
author_facet Rannyele Passos Ribeiro
Guillermo Ponz-Segrelles
Christoph Bleidorn
Maria Teresa Aguado
author_sort Rannyele Passos Ribeiro
title Comparative transcriptomics in Syllidae (Annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct process
title_short Comparative transcriptomics in Syllidae (Annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct process
title_full Comparative transcriptomics in Syllidae (Annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct process
title_fullStr Comparative transcriptomics in Syllidae (Annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct process
title_full_unstemmed Comparative transcriptomics in Syllidae (Annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct process
title_sort comparative transcriptomics in syllidae (annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct process
publisher BMC
series BMC Genomics
issn 1471-2164
publishDate 2019-11-01
description Abstract Background Annelids exhibit remarkable postembryonic developmental abilities. Most annelids grow during their whole life by adding segments through the action of a segment addition zone (SAZ) located in front of the pygidium. In addition, they show an outstanding ability to regenerate their bodies. Experimental evidence and field observations show that many annelids are able to regenerate their posterior bodies, while anterior regeneration is often limited or absent. Syllidae, for instance, usually show high abilities of posterior regeneration, although anterior regeneration varies across species. Some syllids are able to partially restore the anterior end, while others regenerate all lost anterior body after bisection. Here, we used comparative transcriptomics to detect changes in the gene expression profiles during anterior regeneration, posterior regeneration and regular growth of two syllid species: Sphaerosyllis hystrix and Syllis gracilis; which exhibit limited and complete anterior regeneration, respectively. Results We detected a high number of genes with differential expression: 4771 genes in S. hystrix (limited anterior regeneration) and 1997 genes in S. gracilis (complete anterior regeneration). For both species, the comparative transcriptomic analysis showed that gene expression during posterior regeneration and regular growth was very similar, whereas anterior regeneration was characterized by up-regulation of several genes. Among the up-regulated genes, we identified putative homologs of regeneration-related genes associated to cellular proliferation, nervous system development, establishment of body axis, and stem-cellness; such as rup and JNK (in S. hystrix); and glutamine synthetase, elav, slit, Hox genes, β-catenin and PL10 (in S. gracilis). Conclusions Posterior regeneration and regular growth show no significant differences in gene expression in the herein investigated syllids. However, anterior regeneration is associated with a clear change in terms of gene expression in both species. Our comparative transcriptomic analysis was able to detect differential expression of some regeneration-related genes, suggesting that syllids share some features of the regenerative mechanisms already known for other annelids and invertebrates.
topic Regeneration
Annelida
Syllidae
RNA-seq
Transcriptome
Hox genes
url http://link.springer.com/article/10.1186/s12864-019-6223-y
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