Molecular evolution of genes encoding allergen proteins in the peanuts genus Arachis: Structural and functional implications.

Food allergies are severe immune responses to plant and animal products mediated by immunoglobulin E (IgE). Peanuts (Arachis hypogaea L.) are among the top 15 crops that feed the world. However, peanuts is among the "big eight food allergens", and allergies induced by peanuts are a signifi...

Full description

Bibliographic Details
Main Authors: Khidir W Hilu, Sheena A Friend, Viruthika Vallanadu, Anne M Brown, Louis R Hollingsworth, David R Bevan
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0222440
id doaj-e91634d0c7e2433194c3c4ce45ab6148
record_format Article
spelling doaj-e91634d0c7e2433194c3c4ce45ab61482021-03-03T21:14:43ZengPublic Library of Science (PLoS)PLoS ONE1932-62032019-01-011411e022244010.1371/journal.pone.0222440Molecular evolution of genes encoding allergen proteins in the peanuts genus Arachis: Structural and functional implications.Khidir W HiluSheena A FriendViruthika VallanaduAnne M BrownLouis R HollingsworthDavid R BevanFood allergies are severe immune responses to plant and animal products mediated by immunoglobulin E (IgE). Peanuts (Arachis hypogaea L.) are among the top 15 crops that feed the world. However, peanuts is among the "big eight food allergens", and allergies induced by peanuts are a significant public health problem and a life-threatening concern. Targeted mutation studies in peanuts demonstrate that single residue alterations in these allergen proteins could result in substantial reduction in allergenicity. Knowledge of peanut allergen proteins is confined to the allotetraploid crop and its two progenitors. We explored frequencies and positions of natural mutations in the hyperallergenic homologues Ara h 2 and Ara h 6 in newly generated sequences for 24 Arachis wild species and the crop species, assessed potential mutational impact on allergenicity using immunoblots and structural modeling, and evaluated whether these mutations follow evolutionary trends. We uncovered a wealth of natural mutations, both substitutions and gaps, including the elimination of immunodominant epitopes in some species. These molecular alterations appear to be associated with substantial reductions in allergenicity. The study demonstrated that Ara h 2 and Ara h 6 follow contrasting modes of natural selection and opposing mutational patterns, particularly in epitope regions. Phylogenetic analysis revealed a progressive trend towards immunodominant epitope evolution in Ara h 2. The findings provide valuable insight into the interactions among mutations, protein structure and immune system response, thus presenting a valuable platform for future manipulation of allergens to minimize, treat or eliminate allergenicity. The study strongly encourages exploration of genepools of economically important plants in allergenicity research.https://doi.org/10.1371/journal.pone.0222440
collection DOAJ
language English
format Article
sources DOAJ
author Khidir W Hilu
Sheena A Friend
Viruthika Vallanadu
Anne M Brown
Louis R Hollingsworth
David R Bevan
spellingShingle Khidir W Hilu
Sheena A Friend
Viruthika Vallanadu
Anne M Brown
Louis R Hollingsworth
David R Bevan
Molecular evolution of genes encoding allergen proteins in the peanuts genus Arachis: Structural and functional implications.
PLoS ONE
author_facet Khidir W Hilu
Sheena A Friend
Viruthika Vallanadu
Anne M Brown
Louis R Hollingsworth
David R Bevan
author_sort Khidir W Hilu
title Molecular evolution of genes encoding allergen proteins in the peanuts genus Arachis: Structural and functional implications.
title_short Molecular evolution of genes encoding allergen proteins in the peanuts genus Arachis: Structural and functional implications.
title_full Molecular evolution of genes encoding allergen proteins in the peanuts genus Arachis: Structural and functional implications.
title_fullStr Molecular evolution of genes encoding allergen proteins in the peanuts genus Arachis: Structural and functional implications.
title_full_unstemmed Molecular evolution of genes encoding allergen proteins in the peanuts genus Arachis: Structural and functional implications.
title_sort molecular evolution of genes encoding allergen proteins in the peanuts genus arachis: structural and functional implications.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2019-01-01
description Food allergies are severe immune responses to plant and animal products mediated by immunoglobulin E (IgE). Peanuts (Arachis hypogaea L.) are among the top 15 crops that feed the world. However, peanuts is among the "big eight food allergens", and allergies induced by peanuts are a significant public health problem and a life-threatening concern. Targeted mutation studies in peanuts demonstrate that single residue alterations in these allergen proteins could result in substantial reduction in allergenicity. Knowledge of peanut allergen proteins is confined to the allotetraploid crop and its two progenitors. We explored frequencies and positions of natural mutations in the hyperallergenic homologues Ara h 2 and Ara h 6 in newly generated sequences for 24 Arachis wild species and the crop species, assessed potential mutational impact on allergenicity using immunoblots and structural modeling, and evaluated whether these mutations follow evolutionary trends. We uncovered a wealth of natural mutations, both substitutions and gaps, including the elimination of immunodominant epitopes in some species. These molecular alterations appear to be associated with substantial reductions in allergenicity. The study demonstrated that Ara h 2 and Ara h 6 follow contrasting modes of natural selection and opposing mutational patterns, particularly in epitope regions. Phylogenetic analysis revealed a progressive trend towards immunodominant epitope evolution in Ara h 2. The findings provide valuable insight into the interactions among mutations, protein structure and immune system response, thus presenting a valuable platform for future manipulation of allergens to minimize, treat or eliminate allergenicity. The study strongly encourages exploration of genepools of economically important plants in allergenicity research.
url https://doi.org/10.1371/journal.pone.0222440
work_keys_str_mv AT khidirwhilu molecularevolutionofgenesencodingallergenproteinsinthepeanutsgenusarachisstructuralandfunctionalimplications
AT sheenaafriend molecularevolutionofgenesencodingallergenproteinsinthepeanutsgenusarachisstructuralandfunctionalimplications
AT viruthikavallanadu molecularevolutionofgenesencodingallergenproteinsinthepeanutsgenusarachisstructuralandfunctionalimplications
AT annembrown molecularevolutionofgenesencodingallergenproteinsinthepeanutsgenusarachisstructuralandfunctionalimplications
AT louisrhollingsworth molecularevolutionofgenesencodingallergenproteinsinthepeanutsgenusarachisstructuralandfunctionalimplications
AT davidrbevan molecularevolutionofgenesencodingallergenproteinsinthepeanutsgenusarachisstructuralandfunctionalimplications
_version_ 1714818007207772160