Single-cell transcriptome sequencing: recent advances and remaining challenges [version 1; referees: 2 approved]

Single-cell RNA-sequencing methods are now robust and economically practical and are becoming a powerful tool for high-throughput, high-resolution transcriptomic analysis of cell states and dynamics. Single-cell approaches circumvent the averaging artifacts associated with traditional bulk populatio...

Full description

Bibliographic Details
Main Authors: Serena Liu, Cole Trapnell
Format: Article
Language:English
Published: F1000 Research Ltd 2016-02-01
Series:F1000Research
Subjects:
Online Access:http://f1000research.com/articles/5-182/v1
Description
Summary:Single-cell RNA-sequencing methods are now robust and economically practical and are becoming a powerful tool for high-throughput, high-resolution transcriptomic analysis of cell states and dynamics. Single-cell approaches circumvent the averaging artifacts associated with traditional bulk population data, yielding new insights into the cellular diversity underlying superficially homogeneous populations. Thus far, single-cell RNA-sequencing has already shown great effectiveness in unraveling complex cell populations, reconstructing developmental trajectories, and modeling transcriptional dynamics. Ongoing technical improvements to single-cell RNA-sequencing throughput and sensitivity, the development of more sophisticated analytical frameworks for single-cell data, and an increasing array of complementary single-cell assays all promise to expand the usefulness and potential applications of single-cell transcriptomic profiling.
ISSN:2046-1402