Predicting Variation of DNA Shape Preferences in Protein-DNA Interaction in Cancer Cells with a New Biophysical Model

DNA shape readout is an important mechanism of transcription factor target site recognition, in addition to the sequence readout. Several machine learning-based models of transcription factor–DNA interactions, considering DNA shape features, have been developed in recent years. Here, we present a ne...

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Bibliographic Details
Main Authors: Kirill Batmanov, Junbai Wang
Format: Article
Language:English
Published: MDPI AG 2017-09-01
Series:Genes
Subjects:
Online Access:https://www.mdpi.com/2073-4425/8/9/233