Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells
<i>Waldenström</i> Macroglobulinemia (WM) is a B-cell lymphoma characterized by the precursor condition IgM monoclonal gammopathies of undetermined significance (IgM MGUS). We performed a gene expression profiling study to compare the transcriptome signatures of bone marrow (BM) B-cells...
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doaj-e69385bbd6d74a659c48eda8e79ad4722021-04-12T23:03:31ZengMDPI AGCancers2072-66942021-04-01131837183710.3390/cancers13081837Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma CellsAlessandra Trojani0Barbara Di Camillo1Luca Emanuele Bossi2Livia Leuzzi3Antonino Greco4Alessandra Tedeschi5Anna Maria Frustaci6Marina Deodato7Giulia Zamprogna8Alessandro Beghini9Roberto Cairoli10Department of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Information Engineering, University of Padova, 35131 Padova, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDivision of Hematology and Bone Marrow Transplant, Cardinale Giovanni Panico Hospital, Tricase, 73030 Lecce, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Health Sciences, University of Milan, 20142 Milan, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, Italy<i>Waldenström</i> Macroglobulinemia (WM) is a B-cell lymphoma characterized by the precursor condition IgM monoclonal gammopathies of undetermined significance (IgM MGUS). We performed a gene expression profiling study to compare the transcriptome signatures of bone marrow (BM) B-cells and plasma cells of 36 WM patients, 13 IgM MGUS cases, and 7 healthy subjects used as controls (CTRLs) by Affymetrix microarray. We determined 2038 differentially <i>expressed genes</i> (DEGs) in CD19+ cells and 29 DEGs genes in CD138+ cells, respectively. The DEGs identified in B-cells were associated with KEGG pathways, mainly involved in hematopoietic cell lineage antigens, cell adhesion/focal adhesion/transmembrane proteins, adherens junctions, Wnt-signaling pathway, BCR-signaling pathway, calcium signaling pathway, complement/coagulation cascade, platelet activation, cytokine-cytokine receptor interactions, and signaling pathways responsible for cell cycle, apoptosis, proliferation and survival. In conclusion, we showed the deregulation of groups of genes belonging to KEGG pathways in the comparison among WM vs. IgM MGUS vs. CTRLs in B-cells. Interestingly, a small set of genes in B-cells displayed a common transcriptome expression profile between WM and IgM MGUS compared to CTRLs, suggesting its possible role in the risk of transformation of IgM MGUS to WM.https://www.mdpi.com/2072-6694/13/8/1837<i>Waldenström</i> MacroglobulinemiaIgM monoclonal gammopathies of undetermined significancegene expression profilingDEGs (differentially expressed genes)KEGG signaling pathways |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Alessandra Trojani Barbara Di Camillo Luca Emanuele Bossi Livia Leuzzi Antonino Greco Alessandra Tedeschi Anna Maria Frustaci Marina Deodato Giulia Zamprogna Alessandro Beghini Roberto Cairoli |
spellingShingle |
Alessandra Trojani Barbara Di Camillo Luca Emanuele Bossi Livia Leuzzi Antonino Greco Alessandra Tedeschi Anna Maria Frustaci Marina Deodato Giulia Zamprogna Alessandro Beghini Roberto Cairoli Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells Cancers <i>Waldenström</i> Macroglobulinemia IgM monoclonal gammopathies of undetermined significance gene expression profiling DEGs (differentially expressed genes) KEGG signaling pathways |
author_facet |
Alessandra Trojani Barbara Di Camillo Luca Emanuele Bossi Livia Leuzzi Antonino Greco Alessandra Tedeschi Anna Maria Frustaci Marina Deodato Giulia Zamprogna Alessandro Beghini Roberto Cairoli |
author_sort |
Alessandra Trojani |
title |
Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells |
title_short |
Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells |
title_full |
Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells |
title_fullStr |
Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells |
title_full_unstemmed |
Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells |
title_sort |
identification of a candidate gene set signature for the risk of progression in igm mgus to smoldering/symptomatic <i>waldenström</i> macroglobulinemia (wm) by a comparative transcriptome analysis of b cells and plasma cells |
publisher |
MDPI AG |
series |
Cancers |
issn |
2072-6694 |
publishDate |
2021-04-01 |
description |
<i>Waldenström</i> Macroglobulinemia (WM) is a B-cell lymphoma characterized by the precursor condition IgM monoclonal gammopathies of undetermined significance (IgM MGUS). We performed a gene expression profiling study to compare the transcriptome signatures of bone marrow (BM) B-cells and plasma cells of 36 WM patients, 13 IgM MGUS cases, and 7 healthy subjects used as controls (CTRLs) by Affymetrix microarray. We determined 2038 differentially <i>expressed genes</i> (DEGs) in CD19+ cells and 29 DEGs genes in CD138+ cells, respectively. The DEGs identified in B-cells were associated with KEGG pathways, mainly involved in hematopoietic cell lineage antigens, cell adhesion/focal adhesion/transmembrane proteins, adherens junctions, Wnt-signaling pathway, BCR-signaling pathway, calcium signaling pathway, complement/coagulation cascade, platelet activation, cytokine-cytokine receptor interactions, and signaling pathways responsible for cell cycle, apoptosis, proliferation and survival. In conclusion, we showed the deregulation of groups of genes belonging to KEGG pathways in the comparison among WM vs. IgM MGUS vs. CTRLs in B-cells. Interestingly, a small set of genes in B-cells displayed a common transcriptome expression profile between WM and IgM MGUS compared to CTRLs, suggesting its possible role in the risk of transformation of IgM MGUS to WM. |
topic |
<i>Waldenström</i> Macroglobulinemia IgM monoclonal gammopathies of undetermined significance gene expression profiling DEGs (differentially expressed genes) KEGG signaling pathways |
url |
https://www.mdpi.com/2072-6694/13/8/1837 |
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