Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells

<i>Waldenström</i> Macroglobulinemia (WM) is a B-cell lymphoma characterized by the precursor condition IgM monoclonal gammopathies of undetermined significance (IgM MGUS). We performed a gene expression profiling study to compare the transcriptome signatures of bone marrow (BM) B-cells...

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Main Authors: Alessandra Trojani, Barbara Di Camillo, Luca Emanuele Bossi, Livia Leuzzi, Antonino Greco, Alessandra Tedeschi, Anna Maria Frustaci, Marina Deodato, Giulia Zamprogna, Alessandro Beghini, Roberto Cairoli
Format: Article
Language:English
Published: MDPI AG 2021-04-01
Series:Cancers
Subjects:
Online Access:https://www.mdpi.com/2072-6694/13/8/1837
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spelling doaj-e69385bbd6d74a659c48eda8e79ad4722021-04-12T23:03:31ZengMDPI AGCancers2072-66942021-04-01131837183710.3390/cancers13081837Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma CellsAlessandra Trojani0Barbara Di Camillo1Luca Emanuele Bossi2Livia Leuzzi3Antonino Greco4Alessandra Tedeschi5Anna Maria Frustaci6Marina Deodato7Giulia Zamprogna8Alessandro Beghini9Roberto Cairoli10Department of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Information Engineering, University of Padova, 35131 Padova, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDivision of Hematology and Bone Marrow Transplant, Cardinale Giovanni Panico Hospital, Tricase, 73030 Lecce, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, ItalyDepartment of Health Sciences, University of Milan, 20142 Milan, ItalyDepartment of Hematology, ASST Grande Ospedale Metropolitano Niguarda, 20162 Milan, Italy<i>Waldenström</i> Macroglobulinemia (WM) is a B-cell lymphoma characterized by the precursor condition IgM monoclonal gammopathies of undetermined significance (IgM MGUS). We performed a gene expression profiling study to compare the transcriptome signatures of bone marrow (BM) B-cells and plasma cells of 36 WM patients, 13 IgM MGUS cases, and 7 healthy subjects used as controls (CTRLs) by Affymetrix microarray. We determined 2038 differentially <i>expressed genes</i> (DEGs) in CD19+ cells and 29 DEGs genes in CD138+ cells, respectively. The DEGs identified in B-cells were associated with KEGG pathways, mainly involved in hematopoietic cell lineage antigens, cell adhesion/focal adhesion/transmembrane proteins, adherens junctions, Wnt-signaling pathway, BCR-signaling pathway, calcium signaling pathway, complement/coagulation cascade, platelet activation, cytokine-cytokine receptor interactions, and signaling pathways responsible for cell cycle, apoptosis, proliferation and survival. In conclusion, we showed the deregulation of groups of genes belonging to KEGG pathways in the comparison among WM vs. IgM MGUS vs. CTRLs in B-cells. Interestingly, a small set of genes in B-cells displayed a common transcriptome expression profile between WM and IgM MGUS compared to CTRLs, suggesting its possible role in the risk of transformation of IgM MGUS to WM.https://www.mdpi.com/2072-6694/13/8/1837<i>Waldenström</i> MacroglobulinemiaIgM monoclonal gammopathies of undetermined significancegene expression profilingDEGs (differentially expressed genes)KEGG signaling pathways
collection DOAJ
language English
format Article
sources DOAJ
author Alessandra Trojani
Barbara Di Camillo
Luca Emanuele Bossi
Livia Leuzzi
Antonino Greco
Alessandra Tedeschi
Anna Maria Frustaci
Marina Deodato
Giulia Zamprogna
Alessandro Beghini
Roberto Cairoli
spellingShingle Alessandra Trojani
Barbara Di Camillo
Luca Emanuele Bossi
Livia Leuzzi
Antonino Greco
Alessandra Tedeschi
Anna Maria Frustaci
Marina Deodato
Giulia Zamprogna
Alessandro Beghini
Roberto Cairoli
Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells
Cancers
<i>Waldenström</i> Macroglobulinemia
IgM monoclonal gammopathies of undetermined significance
gene expression profiling
DEGs (differentially expressed genes)
KEGG signaling pathways
author_facet Alessandra Trojani
Barbara Di Camillo
Luca Emanuele Bossi
Livia Leuzzi
Antonino Greco
Alessandra Tedeschi
Anna Maria Frustaci
Marina Deodato
Giulia Zamprogna
Alessandro Beghini
Roberto Cairoli
author_sort Alessandra Trojani
title Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells
title_short Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells
title_full Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells
title_fullStr Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells
title_full_unstemmed Identification of a Candidate Gene Set Signature for the Risk of Progression in IgM MGUS to Smoldering/Symptomatic <i>Waldenström</i> Macroglobulinemia (WM) by a Comparative Transcriptome Analysis of B Cells and Plasma Cells
title_sort identification of a candidate gene set signature for the risk of progression in igm mgus to smoldering/symptomatic <i>waldenström</i> macroglobulinemia (wm) by a comparative transcriptome analysis of b cells and plasma cells
publisher MDPI AG
series Cancers
issn 2072-6694
publishDate 2021-04-01
description <i>Waldenström</i> Macroglobulinemia (WM) is a B-cell lymphoma characterized by the precursor condition IgM monoclonal gammopathies of undetermined significance (IgM MGUS). We performed a gene expression profiling study to compare the transcriptome signatures of bone marrow (BM) B-cells and plasma cells of 36 WM patients, 13 IgM MGUS cases, and 7 healthy subjects used as controls (CTRLs) by Affymetrix microarray. We determined 2038 differentially <i>expressed genes</i> (DEGs) in CD19+ cells and 29 DEGs genes in CD138+ cells, respectively. The DEGs identified in B-cells were associated with KEGG pathways, mainly involved in hematopoietic cell lineage antigens, cell adhesion/focal adhesion/transmembrane proteins, adherens junctions, Wnt-signaling pathway, BCR-signaling pathway, calcium signaling pathway, complement/coagulation cascade, platelet activation, cytokine-cytokine receptor interactions, and signaling pathways responsible for cell cycle, apoptosis, proliferation and survival. In conclusion, we showed the deregulation of groups of genes belonging to KEGG pathways in the comparison among WM vs. IgM MGUS vs. CTRLs in B-cells. Interestingly, a small set of genes in B-cells displayed a common transcriptome expression profile between WM and IgM MGUS compared to CTRLs, suggesting its possible role in the risk of transformation of IgM MGUS to WM.
topic <i>Waldenström</i> Macroglobulinemia
IgM monoclonal gammopathies of undetermined significance
gene expression profiling
DEGs (differentially expressed genes)
KEGG signaling pathways
url https://www.mdpi.com/2072-6694/13/8/1837
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