Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere

Low phosphorus soils are thought to constitute the majority of soils worldwide and cannot support intensive agriculture without high fertilizer inputs. Rhizobacteria are well-known to modify P dynamics and an increased bacterial diversity normally has a positive impact on various process rates. Howe...

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Main Authors: Usman Irshad, Etienne Yergeau
Format: Article
Language:English
Published: Frontiers Media S.A. 2018-09-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmicb.2018.01990/full
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spelling doaj-e6805e7542514a908c98b3f4ff4aa0da2020-11-24T20:52:10ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2018-09-01910.3389/fmicb.2018.01990392901Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat RhizosphereUsman Irshad0Usman Irshad1Etienne Yergeau2Centre INRS–Institut Armand-Frappier, Institut National de la Recherche Scientifique, Université du Québec, Laval, QC, CanadaDepartment of Environmental Sciences, COMSATS University Islamabad, Abbottabad, PakistanCentre INRS–Institut Armand-Frappier, Institut National de la Recherche Scientifique, Université du Québec, Laval, QC, CanadaLow phosphorus soils are thought to constitute the majority of soils worldwide and cannot support intensive agriculture without high fertilizer inputs. Rhizobacteria are well-known to modify P dynamics and an increased bacterial diversity normally has a positive impact on various process rates. However, it is not known how variation in bacterial diversity at the subspecies level could influence trophic interactions in the rhizosphere and its consequences on plant P nutrition. We therefore hypothesized that the interactions between closely related P solubilizing bacteria and their grazing nematodes could improve plant P dynamics from an unavailable P source. We isolated four Pseudomonas poae strains and extracted nematodes from a Saskatchewan wheat field soil sample. The potential of all bacterial isolates with and without nematodes for increasing P availability in the wheat rhizosphere was tested in controlled microcosms with Ca3(PO4)2 as sole P source. Liberated P, phosphatase activity, plant P and bacterial abundance based on phnX gene copies were determined. Phosphorus solubilization efficiency of isolates varied between isolates whereas phosphatase enzyme activity was only detected under nematodes grazing and during the first 15 days of the experiment. Nematodes grazing upon individual Pseudomonas poae increased phosphatase enzyme activity, bacterial abundance, but decreased plant P concentration compared to non-grazed system. In contrast, the treatment combining all Pseudomonas poae isolates together with nematodes resulted in significant increases in P availability and plant P concentration. Diverse P-solubilizing efficiency and interaction with nematodes within the same bacterial “species” suggest that P dynamics might be linked to micro variation in soil diversity that would not accurately be picked up using common tools such as 16S rRNA gene sequencing.https://www.frontiersin.org/article/10.3389/fmicb.2018.01990/fullphosphorus solubilizing bacteriaPseudomonas poaenematodesphnX genewheat rhizospheretricalcium P
collection DOAJ
language English
format Article
sources DOAJ
author Usman Irshad
Usman Irshad
Etienne Yergeau
spellingShingle Usman Irshad
Usman Irshad
Etienne Yergeau
Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
Frontiers in Microbiology
phosphorus solubilizing bacteria
Pseudomonas poae
nematodes
phnX gene
wheat rhizosphere
tricalcium P
author_facet Usman Irshad
Usman Irshad
Etienne Yergeau
author_sort Usman Irshad
title Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title_short Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title_full Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title_fullStr Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title_full_unstemmed Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title_sort bacterial subspecies variation and nematode grazing change p dynamics in the wheat rhizosphere
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2018-09-01
description Low phosphorus soils are thought to constitute the majority of soils worldwide and cannot support intensive agriculture without high fertilizer inputs. Rhizobacteria are well-known to modify P dynamics and an increased bacterial diversity normally has a positive impact on various process rates. However, it is not known how variation in bacterial diversity at the subspecies level could influence trophic interactions in the rhizosphere and its consequences on plant P nutrition. We therefore hypothesized that the interactions between closely related P solubilizing bacteria and their grazing nematodes could improve plant P dynamics from an unavailable P source. We isolated four Pseudomonas poae strains and extracted nematodes from a Saskatchewan wheat field soil sample. The potential of all bacterial isolates with and without nematodes for increasing P availability in the wheat rhizosphere was tested in controlled microcosms with Ca3(PO4)2 as sole P source. Liberated P, phosphatase activity, plant P and bacterial abundance based on phnX gene copies were determined. Phosphorus solubilization efficiency of isolates varied between isolates whereas phosphatase enzyme activity was only detected under nematodes grazing and during the first 15 days of the experiment. Nematodes grazing upon individual Pseudomonas poae increased phosphatase enzyme activity, bacterial abundance, but decreased plant P concentration compared to non-grazed system. In contrast, the treatment combining all Pseudomonas poae isolates together with nematodes resulted in significant increases in P availability and plant P concentration. Diverse P-solubilizing efficiency and interaction with nematodes within the same bacterial “species” suggest that P dynamics might be linked to micro variation in soil diversity that would not accurately be picked up using common tools such as 16S rRNA gene sequencing.
topic phosphorus solubilizing bacteria
Pseudomonas poae
nematodes
phnX gene
wheat rhizosphere
tricalcium P
url https://www.frontiersin.org/article/10.3389/fmicb.2018.01990/full
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