Structure and stability of recombinant bovine odorant-binding protein: II. Unfolding of the monomeric forms

In a family of monomeric odorant-binding proteins (OBPs), bovine OBP (bOBP), that lacks conserved disulfide bond found in other OBPs, occupies unique niche because of its ability to form domain-swapped dimers. In this study, we analyzed conformational stabilities of the recombinant bOBP and its mono...

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Main Authors: Olga V. Stepanenko, Denis O. Roginskii, Olesya V. Stepanenko, Irina M. Kuznetsova, Vladimir N. Uversky, Konstantin K. Turoverov
Format: Article
Language:English
Published: PeerJ Inc. 2016-04-01
Series:PeerJ
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Online Access:https://peerj.com/articles/1574.pdf
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spelling doaj-e5aa553817ce47ddb6880758f2b398672020-11-25T00:55:20ZengPeerJ Inc.PeerJ2167-83592016-04-014e157410.7717/peerj.1574 Structure and stability of recombinant bovine odorant-binding protein: II. Unfolding of the monomeric formsOlga V. Stepanenko0Denis O. Roginskii1Olesya V. Stepanenko2Irina M. Kuznetsova3Vladimir N. Uversky4Konstantin K. Turoverov5Laboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, RussiaLaboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, RussiaLaboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, RussiaLaboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, RussiaLaboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, RussiaLaboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, RussiaIn a family of monomeric odorant-binding proteins (OBPs), bovine OBP (bOBP), that lacks conserved disulfide bond found in other OBPs, occupies unique niche because of its ability to form domain-swapped dimers. In this study, we analyzed conformational stabilities of the recombinant bOBP and its monomeric variants, the bOBP-Gly121+ mutant containing an additional glycine residue after the residue 121 of the bOBP, and the GCC-bOBP mutant obtained from the bOBP-Gly121+ form by introduction of the Trp64Cys/His155Cys double mutation to restore the canonical disulfide bond. We also analyzed the effect of the natural ligand binding on the conformational stabilities of these bOBP variants. Our data are consistent with the conclusion that the unfolding-refolding pathways of the recombinant bOBP and its mutant monomeric forms bOBP-Gly121+ and GCC-bOBP are similar and do not depend on the oligomeric status of the protein. This clearly shows that the information on the unfolding-refolding mechanism is encoded in the structure of the bOBP monomers. However, the process of the bOBP unfolding is significantly complicated by the formation of the domain-swapped dimer, and the rates of the unfolding-refolding reactions essentially depend on the conditions in which the protein is located.https://peerj.com/articles/1574.pdfOdorant-binding proteinLigand bindingDisulfide bondDomain swappingUnfolding-refolding reactionConformational stability
collection DOAJ
language English
format Article
sources DOAJ
author Olga V. Stepanenko
Denis O. Roginskii
Olesya V. Stepanenko
Irina M. Kuznetsova
Vladimir N. Uversky
Konstantin K. Turoverov
spellingShingle Olga V. Stepanenko
Denis O. Roginskii
Olesya V. Stepanenko
Irina M. Kuznetsova
Vladimir N. Uversky
Konstantin K. Turoverov
Structure and stability of recombinant bovine odorant-binding protein: II. Unfolding of the monomeric forms
PeerJ
Odorant-binding protein
Ligand binding
Disulfide bond
Domain swapping
Unfolding-refolding reaction
Conformational stability
author_facet Olga V. Stepanenko
Denis O. Roginskii
Olesya V. Stepanenko
Irina M. Kuznetsova
Vladimir N. Uversky
Konstantin K. Turoverov
author_sort Olga V. Stepanenko
title Structure and stability of recombinant bovine odorant-binding protein: II. Unfolding of the monomeric forms
title_short Structure and stability of recombinant bovine odorant-binding protein: II. Unfolding of the monomeric forms
title_full Structure and stability of recombinant bovine odorant-binding protein: II. Unfolding of the monomeric forms
title_fullStr Structure and stability of recombinant bovine odorant-binding protein: II. Unfolding of the monomeric forms
title_full_unstemmed Structure and stability of recombinant bovine odorant-binding protein: II. Unfolding of the monomeric forms
title_sort structure and stability of recombinant bovine odorant-binding protein: ii. unfolding of the monomeric forms
publisher PeerJ Inc.
series PeerJ
issn 2167-8359
publishDate 2016-04-01
description In a family of monomeric odorant-binding proteins (OBPs), bovine OBP (bOBP), that lacks conserved disulfide bond found in other OBPs, occupies unique niche because of its ability to form domain-swapped dimers. In this study, we analyzed conformational stabilities of the recombinant bOBP and its monomeric variants, the bOBP-Gly121+ mutant containing an additional glycine residue after the residue 121 of the bOBP, and the GCC-bOBP mutant obtained from the bOBP-Gly121+ form by introduction of the Trp64Cys/His155Cys double mutation to restore the canonical disulfide bond. We also analyzed the effect of the natural ligand binding on the conformational stabilities of these bOBP variants. Our data are consistent with the conclusion that the unfolding-refolding pathways of the recombinant bOBP and its mutant monomeric forms bOBP-Gly121+ and GCC-bOBP are similar and do not depend on the oligomeric status of the protein. This clearly shows that the information on the unfolding-refolding mechanism is encoded in the structure of the bOBP monomers. However, the process of the bOBP unfolding is significantly complicated by the formation of the domain-swapped dimer, and the rates of the unfolding-refolding reactions essentially depend on the conditions in which the protein is located.
topic Odorant-binding protein
Ligand binding
Disulfide bond
Domain swapping
Unfolding-refolding reaction
Conformational stability
url https://peerj.com/articles/1574.pdf
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