A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.

Indigenous populations of the Tibetan plateau have attracted much attention for their good performance at extreme high altitude. Most genetic studies of Tibetan adaptations have used genetic variation data at the genome scale, while genetic inferences about their demography and population structure...

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Main Authors: Choongwon Jeong, Benjamin M Peter, Buddha Basnyat, Maniraj Neupane, Cynthia M Beall, Geoff Childs, Sienna R Craig, John Novembre, Anna Di Rienzo
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2017-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC5407838?pdf=render
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spelling doaj-e586f2ca013a46af9336a925826ed1292020-11-24T20:52:36ZengPublic Library of Science (PLoS)PLoS ONE1932-62032017-01-01124e017588510.1371/journal.pone.0175885A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.Choongwon JeongBenjamin M PeterBuddha BasnyatManiraj NeupaneCynthia M BeallGeoff ChildsSienna R CraigJohn NovembreAnna Di RienzoIndigenous populations of the Tibetan plateau have attracted much attention for their good performance at extreme high altitude. Most genetic studies of Tibetan adaptations have used genetic variation data at the genome scale, while genetic inferences about their demography and population structure are largely based on uniparental markers. To provide genome-wide information on population structure, we analyzed new and published data of 338 individuals from indigenous populations across the plateau in conjunction with worldwide genetic variation data. We found a clear signal of genetic stratification across the east-west axis within Tibetan samples. Samples from more eastern locations tend to have higher genetic affinity with lowland East Asians, which can be explained by more gene flow from lowland East Asia onto the plateau. Our findings corroborate a previous report of admixture signals in Tibetans, which were based on a subset of the samples analyzed here, but add evidence for isolation by distance in a broader geospatial context.http://europepmc.org/articles/PMC5407838?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Choongwon Jeong
Benjamin M Peter
Buddha Basnyat
Maniraj Neupane
Cynthia M Beall
Geoff Childs
Sienna R Craig
John Novembre
Anna Di Rienzo
spellingShingle Choongwon Jeong
Benjamin M Peter
Buddha Basnyat
Maniraj Neupane
Cynthia M Beall
Geoff Childs
Sienna R Craig
John Novembre
Anna Di Rienzo
A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.
PLoS ONE
author_facet Choongwon Jeong
Benjamin M Peter
Buddha Basnyat
Maniraj Neupane
Cynthia M Beall
Geoff Childs
Sienna R Craig
John Novembre
Anna Di Rienzo
author_sort Choongwon Jeong
title A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.
title_short A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.
title_full A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.
title_fullStr A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.
title_full_unstemmed A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.
title_sort longitudinal cline characterizes the genetic structure of human populations in the tibetan plateau.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2017-01-01
description Indigenous populations of the Tibetan plateau have attracted much attention for their good performance at extreme high altitude. Most genetic studies of Tibetan adaptations have used genetic variation data at the genome scale, while genetic inferences about their demography and population structure are largely based on uniparental markers. To provide genome-wide information on population structure, we analyzed new and published data of 338 individuals from indigenous populations across the plateau in conjunction with worldwide genetic variation data. We found a clear signal of genetic stratification across the east-west axis within Tibetan samples. Samples from more eastern locations tend to have higher genetic affinity with lowland East Asians, which can be explained by more gene flow from lowland East Asia onto the plateau. Our findings corroborate a previous report of admixture signals in Tibetans, which were based on a subset of the samples analyzed here, but add evidence for isolation by distance in a broader geospatial context.
url http://europepmc.org/articles/PMC5407838?pdf=render
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