A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.
Indigenous populations of the Tibetan plateau have attracted much attention for their good performance at extreme high altitude. Most genetic studies of Tibetan adaptations have used genetic variation data at the genome scale, while genetic inferences about their demography and population structure...
Main Authors: | , , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2017-01-01
|
Series: | PLoS ONE |
Online Access: | http://europepmc.org/articles/PMC5407838?pdf=render |
id |
doaj-e586f2ca013a46af9336a925826ed129 |
---|---|
record_format |
Article |
spelling |
doaj-e586f2ca013a46af9336a925826ed1292020-11-24T20:52:36ZengPublic Library of Science (PLoS)PLoS ONE1932-62032017-01-01124e017588510.1371/journal.pone.0175885A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.Choongwon JeongBenjamin M PeterBuddha BasnyatManiraj NeupaneCynthia M BeallGeoff ChildsSienna R CraigJohn NovembreAnna Di RienzoIndigenous populations of the Tibetan plateau have attracted much attention for their good performance at extreme high altitude. Most genetic studies of Tibetan adaptations have used genetic variation data at the genome scale, while genetic inferences about their demography and population structure are largely based on uniparental markers. To provide genome-wide information on population structure, we analyzed new and published data of 338 individuals from indigenous populations across the plateau in conjunction with worldwide genetic variation data. We found a clear signal of genetic stratification across the east-west axis within Tibetan samples. Samples from more eastern locations tend to have higher genetic affinity with lowland East Asians, which can be explained by more gene flow from lowland East Asia onto the plateau. Our findings corroborate a previous report of admixture signals in Tibetans, which were based on a subset of the samples analyzed here, but add evidence for isolation by distance in a broader geospatial context.http://europepmc.org/articles/PMC5407838?pdf=render |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Choongwon Jeong Benjamin M Peter Buddha Basnyat Maniraj Neupane Cynthia M Beall Geoff Childs Sienna R Craig John Novembre Anna Di Rienzo |
spellingShingle |
Choongwon Jeong Benjamin M Peter Buddha Basnyat Maniraj Neupane Cynthia M Beall Geoff Childs Sienna R Craig John Novembre Anna Di Rienzo A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau. PLoS ONE |
author_facet |
Choongwon Jeong Benjamin M Peter Buddha Basnyat Maniraj Neupane Cynthia M Beall Geoff Childs Sienna R Craig John Novembre Anna Di Rienzo |
author_sort |
Choongwon Jeong |
title |
A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau. |
title_short |
A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau. |
title_full |
A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau. |
title_fullStr |
A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau. |
title_full_unstemmed |
A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau. |
title_sort |
longitudinal cline characterizes the genetic structure of human populations in the tibetan plateau. |
publisher |
Public Library of Science (PLoS) |
series |
PLoS ONE |
issn |
1932-6203 |
publishDate |
2017-01-01 |
description |
Indigenous populations of the Tibetan plateau have attracted much attention for their good performance at extreme high altitude. Most genetic studies of Tibetan adaptations have used genetic variation data at the genome scale, while genetic inferences about their demography and population structure are largely based on uniparental markers. To provide genome-wide information on population structure, we analyzed new and published data of 338 individuals from indigenous populations across the plateau in conjunction with worldwide genetic variation data. We found a clear signal of genetic stratification across the east-west axis within Tibetan samples. Samples from more eastern locations tend to have higher genetic affinity with lowland East Asians, which can be explained by more gene flow from lowland East Asia onto the plateau. Our findings corroborate a previous report of admixture signals in Tibetans, which were based on a subset of the samples analyzed here, but add evidence for isolation by distance in a broader geospatial context. |
url |
http://europepmc.org/articles/PMC5407838?pdf=render |
work_keys_str_mv |
AT choongwonjeong alongitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT benjaminmpeter alongitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT buddhabasnyat alongitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT manirajneupane alongitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT cynthiambeall alongitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT geoffchilds alongitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT siennarcraig alongitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT johnnovembre alongitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT annadirienzo alongitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT choongwonjeong longitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT benjaminmpeter longitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT buddhabasnyat longitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT manirajneupane longitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT cynthiambeall longitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT geoffchilds longitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT siennarcraig longitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT johnnovembre longitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau AT annadirienzo longitudinalclinecharacterizesthegeneticstructureofhumanpopulationsinthetibetanplateau |
_version_ |
1716799274034921472 |