The COVID-19 outbreak in Sichuan, China: Epidemiology and impact of interventions.

In January 2020, a COVID-19 outbreak was detected in Sichuan Province of China. Six weeks later, the outbreak was successfully contained. The aim of this work is to characterize the epidemiology of the Sichuan outbreak and estimate the impact of interventions in limiting SARS-CoV-2 transmission. We...

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Main Authors: Quan-Hui Liu, Ana I Bento, Kexin Yang, Hang Zhang, Xiaohan Yang, Stefano Merler, Alessandro Vespignani, Jiancheng Lv, Hongjie Yu, Wei Zhang, Tao Zhou, Marco Ajelli
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2020-12-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1008467
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spelling doaj-e509ca0b91c94bedb9256178d7b0474e2021-04-21T15:44:48ZengPublic Library of Science (PLoS)PLoS Computational Biology1553-734X1553-73582020-12-011612e100846710.1371/journal.pcbi.1008467The COVID-19 outbreak in Sichuan, China: Epidemiology and impact of interventions.Quan-Hui LiuAna I BentoKexin YangHang ZhangXiaohan YangStefano MerlerAlessandro VespignaniJiancheng LvHongjie YuWei ZhangTao ZhouMarco AjelliIn January 2020, a COVID-19 outbreak was detected in Sichuan Province of China. Six weeks later, the outbreak was successfully contained. The aim of this work is to characterize the epidemiology of the Sichuan outbreak and estimate the impact of interventions in limiting SARS-CoV-2 transmission. We analyzed patient records for all laboratory-confirmed cases reported in the province for the period of January 21 to March 16, 2020. To estimate the basic and daily reproduction numbers, we used a Bayesian framework. In addition, we estimated the number of cases averted by the implemented control strategies. The outbreak resulted in 539 confirmed cases, lasted less than two months, and no further local transmission was detected after February 27. The median age of local cases was 8 years older than that of imported cases. We estimated R0 at 2.4 (95% CI: 1.6-3.7). The epidemic was self-sustained for about 3 weeks before going below the epidemic threshold 3 days after the declaration of a public health emergency by Sichuan authorities. Our findings indicate that, were the control measures be adopted four weeks later, the epidemic could have lasted 49 days longer (95% CI: 31-68 days), causing 9,216 more cases (95% CI: 1,317-25,545).https://doi.org/10.1371/journal.pcbi.1008467
collection DOAJ
language English
format Article
sources DOAJ
author Quan-Hui Liu
Ana I Bento
Kexin Yang
Hang Zhang
Xiaohan Yang
Stefano Merler
Alessandro Vespignani
Jiancheng Lv
Hongjie Yu
Wei Zhang
Tao Zhou
Marco Ajelli
spellingShingle Quan-Hui Liu
Ana I Bento
Kexin Yang
Hang Zhang
Xiaohan Yang
Stefano Merler
Alessandro Vespignani
Jiancheng Lv
Hongjie Yu
Wei Zhang
Tao Zhou
Marco Ajelli
The COVID-19 outbreak in Sichuan, China: Epidemiology and impact of interventions.
PLoS Computational Biology
author_facet Quan-Hui Liu
Ana I Bento
Kexin Yang
Hang Zhang
Xiaohan Yang
Stefano Merler
Alessandro Vespignani
Jiancheng Lv
Hongjie Yu
Wei Zhang
Tao Zhou
Marco Ajelli
author_sort Quan-Hui Liu
title The COVID-19 outbreak in Sichuan, China: Epidemiology and impact of interventions.
title_short The COVID-19 outbreak in Sichuan, China: Epidemiology and impact of interventions.
title_full The COVID-19 outbreak in Sichuan, China: Epidemiology and impact of interventions.
title_fullStr The COVID-19 outbreak in Sichuan, China: Epidemiology and impact of interventions.
title_full_unstemmed The COVID-19 outbreak in Sichuan, China: Epidemiology and impact of interventions.
title_sort covid-19 outbreak in sichuan, china: epidemiology and impact of interventions.
publisher Public Library of Science (PLoS)
series PLoS Computational Biology
issn 1553-734X
1553-7358
publishDate 2020-12-01
description In January 2020, a COVID-19 outbreak was detected in Sichuan Province of China. Six weeks later, the outbreak was successfully contained. The aim of this work is to characterize the epidemiology of the Sichuan outbreak and estimate the impact of interventions in limiting SARS-CoV-2 transmission. We analyzed patient records for all laboratory-confirmed cases reported in the province for the period of January 21 to March 16, 2020. To estimate the basic and daily reproduction numbers, we used a Bayesian framework. In addition, we estimated the number of cases averted by the implemented control strategies. The outbreak resulted in 539 confirmed cases, lasted less than two months, and no further local transmission was detected after February 27. The median age of local cases was 8 years older than that of imported cases. We estimated R0 at 2.4 (95% CI: 1.6-3.7). The epidemic was self-sustained for about 3 weeks before going below the epidemic threshold 3 days after the declaration of a public health emergency by Sichuan authorities. Our findings indicate that, were the control measures be adopted four weeks later, the epidemic could have lasted 49 days longer (95% CI: 31-68 days), causing 9,216 more cases (95% CI: 1,317-25,545).
url https://doi.org/10.1371/journal.pcbi.1008467
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