Specific recruitment of soil bacteria and fungi decomposers following a biostimulant application increased crop residues mineralization.

Agriculture is undergoing important changes in order to meet sustainable soil management with respect to biodiversity (namely agroecology). Within this context, alternative solutions to mineral fertilizers such as agricultural biostimulants are thus promoted and being developed. The mechanisms by wh...

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Main Authors: Eve Hellequin, Cécile Monard, Achim Quaiser, Morgane Henriot, Olivier Klarzynski, Françoise Binet
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2018-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0209089
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spelling doaj-e453a07ab1124f5abef715ee44f88b832021-03-03T20:59:59ZengPublic Library of Science (PLoS)PLoS ONE1932-62032018-01-011312e020908910.1371/journal.pone.0209089Specific recruitment of soil bacteria and fungi decomposers following a biostimulant application increased crop residues mineralization.Eve HellequinCécile MonardAchim QuaiserMorgane HenriotOlivier KlarzynskiFrançoise BinetAgriculture is undergoing important changes in order to meet sustainable soil management with respect to biodiversity (namely agroecology). Within this context, alternative solutions to mineral fertilizers such as agricultural biostimulants are thus promoted and being developed. The mechanisms by which some soil biostimulants sustain soil biological functioning and indirectly increase crop yields are still unknown. Our goal in the present study was to demonstrate if and to what extent the application of a soil biostimulant affects the soil heterotrophic microbial communities that are involved in organic matter decomposition and carbon mineralization. We hypothesized that the addition of a biostimulant results in changes in the composition and in the biomass of soil microbial communities. This in turn increases the mineralization of the organic matter derived from crop residues. We performed soil microcosm experiments with the addition of crop residues and a biostimulant, and we monitored the organic carbon (orgC) mineralization and the microbial biomass, along with the microbial community composition by sequencing 16S rRNA gene and ITS amplicons. The addition of a soil biostimulant caused a pH neutralizing effect and simultaneous enhancement of the orgC mineralization of crop residues (+ 400 μg orgC g-1 dry soil) and microbial biomass (+ 60 μg orgC g-1 dry soil) that were linked to changes in the soil microbial communities. Our findings suggest that the soil carbon mineralization enhancement in the presence of the biostimulant was supported by the specific recruitment of soil bacteria and fungi. Whereas archaea remained stable, several operational taxonomic units (OTUs) of indigenous soil bacteria and fungi were enriched and affiliated with known microbial decomposers such as Cytophagaceae, Phaselicystis sp., Verrucomicrobia, Pseudomonas sp., Ramicandelaber sp., and Mortierella sp., resulting in lower soil microbial richness and diversity.https://doi.org/10.1371/journal.pone.0209089
collection DOAJ
language English
format Article
sources DOAJ
author Eve Hellequin
Cécile Monard
Achim Quaiser
Morgane Henriot
Olivier Klarzynski
Françoise Binet
spellingShingle Eve Hellequin
Cécile Monard
Achim Quaiser
Morgane Henriot
Olivier Klarzynski
Françoise Binet
Specific recruitment of soil bacteria and fungi decomposers following a biostimulant application increased crop residues mineralization.
PLoS ONE
author_facet Eve Hellequin
Cécile Monard
Achim Quaiser
Morgane Henriot
Olivier Klarzynski
Françoise Binet
author_sort Eve Hellequin
title Specific recruitment of soil bacteria and fungi decomposers following a biostimulant application increased crop residues mineralization.
title_short Specific recruitment of soil bacteria and fungi decomposers following a biostimulant application increased crop residues mineralization.
title_full Specific recruitment of soil bacteria and fungi decomposers following a biostimulant application increased crop residues mineralization.
title_fullStr Specific recruitment of soil bacteria and fungi decomposers following a biostimulant application increased crop residues mineralization.
title_full_unstemmed Specific recruitment of soil bacteria and fungi decomposers following a biostimulant application increased crop residues mineralization.
title_sort specific recruitment of soil bacteria and fungi decomposers following a biostimulant application increased crop residues mineralization.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2018-01-01
description Agriculture is undergoing important changes in order to meet sustainable soil management with respect to biodiversity (namely agroecology). Within this context, alternative solutions to mineral fertilizers such as agricultural biostimulants are thus promoted and being developed. The mechanisms by which some soil biostimulants sustain soil biological functioning and indirectly increase crop yields are still unknown. Our goal in the present study was to demonstrate if and to what extent the application of a soil biostimulant affects the soil heterotrophic microbial communities that are involved in organic matter decomposition and carbon mineralization. We hypothesized that the addition of a biostimulant results in changes in the composition and in the biomass of soil microbial communities. This in turn increases the mineralization of the organic matter derived from crop residues. We performed soil microcosm experiments with the addition of crop residues and a biostimulant, and we monitored the organic carbon (orgC) mineralization and the microbial biomass, along with the microbial community composition by sequencing 16S rRNA gene and ITS amplicons. The addition of a soil biostimulant caused a pH neutralizing effect and simultaneous enhancement of the orgC mineralization of crop residues (+ 400 μg orgC g-1 dry soil) and microbial biomass (+ 60 μg orgC g-1 dry soil) that were linked to changes in the soil microbial communities. Our findings suggest that the soil carbon mineralization enhancement in the presence of the biostimulant was supported by the specific recruitment of soil bacteria and fungi. Whereas archaea remained stable, several operational taxonomic units (OTUs) of indigenous soil bacteria and fungi were enriched and affiliated with known microbial decomposers such as Cytophagaceae, Phaselicystis sp., Verrucomicrobia, Pseudomonas sp., Ramicandelaber sp., and Mortierella sp., resulting in lower soil microbial richness and diversity.
url https://doi.org/10.1371/journal.pone.0209089
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