Short Communication: Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum)

Setyawan AD, Wiryanto, Suranto, Bermawie N, Sudarmono. 2014. Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum). Nusantara Bioscience 6: 94-101. Fruits of Java cardamoms (Amomum compactum) and true cardamoms (Elettaria cardamomum) had...

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Main Authors: AHMAD DWI SETYAWAN, WIRYANTO, SURANTO, NURLIANI BERMAWIE, SUDARMONO
Format: Article
Language:English
Published: MBI & UNS Solo 2014-05-01
Series:Nusantara Bioscience
Subjects:
Online Access:http://biosains.mipa.uns.ac.id/N/N0601/N060115.pdf
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spelling doaj-e20b338e05774074ac1450eb875f11b32020-11-25T04:07:28ZengMBI & UNS SoloNusantara Bioscience2087-39482087-39562014-05-016194111Short Communication: Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum) AHMAD DWI SETYAWAN0WIRYANTO1SURANTO2NURLIANI BERMAWIE3SUDARMONO4Department of Biology, Faculty of Mathematics and Natural Sciences, Sebelas Maret University, Jl. Ir. Sutami 36a, Surakarta 57126, Central Java, Indonesia. Tel./fax.: +62-271-663375, email: volatileoils@gmail.comDepartment of Biology, Faculty of Mathematics and Natural Sciences, Sebelas Maret University, Jl. Ir. Sutami 36a, Surakarta 57126, Central Java, Indonesia. Department of Biology, Faculty of Mathematics and Natural Sciences, Sebelas Maret University, Jl. Ir. Sutami 36a, Surakarta 57126, Central Java, Indonesia. Indonesian Medicinal and Aromatic Crops Research Institute, Jl. Tentara Pelajar No.3, Cimanggu, Bogor 16111, West Java, Indonesia.Bogor Botanic Garden, Indonesian Institute of Sciences, Jl. Ir. H. Juanda No.13, Bogor16122, West Java, IndonesiaSetyawan AD, Wiryanto, Suranto, Bermawie N, Sudarmono. 2014. Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum). Nusantara Bioscience 6: 94-101. Fruits of Java cardamoms (Amomum compactum) and true cardamoms (Elettaria cardamomum) had long been used as spices, flavoring agent, garnishing plants etc. This research was conducted to find out: (i) variation of isozymic bands in some population of Java cardamoms and true cardamoms; and (ii) phylogenetic relationship of these cardamoms based on variation of isozymic bands. Plant material (i.e. rhizome) of Java cardamoms was collected from Bogor Botanical Garden, and plant material of true cardamoms was gathered from Indonesian Medicinal and Aromatic Crops Research Institute, Bogor, Indonesia. Ten accessions were assayed in every population. The two isozymic systems was assayed, namely esterase (EST) and peroxidase (PER, PRX). Phylogenetic relationship was determined by UPGMA method. The results showed that esterase gave nine isozymic bands, i.e. Rf 0.15, 0.26, 0.29, 0.33, 0.38, 0.42, 0.45, 0.53, and Rf 0.58., while peroxidase gave 10 isozymic bands, i.e. Rf 0.06, 0.14, 0.18, 0.22, 0.26, 0.29, 0.32, 0.37, 0.41, and Rf 0.46. Relationship dendrogram indicated that the number of data will affect the grouping based on species similarity; more and more data was increasingly apparent groupings; within these groups there were variations among its members.http://biosains.mipa.uns.ac.id/N/N0601/N060115.pdfAmomum compactumcardamomsElettaria cardamomumisozymeZingiberaceae
collection DOAJ
language English
format Article
sources DOAJ
author AHMAD DWI SETYAWAN
WIRYANTO
SURANTO
NURLIANI BERMAWIE
SUDARMONO
spellingShingle AHMAD DWI SETYAWAN
WIRYANTO
SURANTO
NURLIANI BERMAWIE
SUDARMONO
Short Communication: Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum)
Nusantara Bioscience
Amomum compactum
cardamoms
Elettaria cardamomum
isozyme
Zingiberaceae
author_facet AHMAD DWI SETYAWAN
WIRYANTO
SURANTO
NURLIANI BERMAWIE
SUDARMONO
author_sort AHMAD DWI SETYAWAN
title Short Communication: Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum)
title_short Short Communication: Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum)
title_full Short Communication: Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum)
title_fullStr Short Communication: Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum)
title_full_unstemmed Short Communication: Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum)
title_sort short communication: comparisons of isozyme diversity in local java cardamom (amomum compactum) and true cardamom (elettaria cardamomum)
publisher MBI & UNS Solo
series Nusantara Bioscience
issn 2087-3948
2087-3956
publishDate 2014-05-01
description Setyawan AD, Wiryanto, Suranto, Bermawie N, Sudarmono. 2014. Comparisons of isozyme diversity in local Java cardamom (Amomum compactum) and true cardamom (Elettaria cardamomum). Nusantara Bioscience 6: 94-101. Fruits of Java cardamoms (Amomum compactum) and true cardamoms (Elettaria cardamomum) had long been used as spices, flavoring agent, garnishing plants etc. This research was conducted to find out: (i) variation of isozymic bands in some population of Java cardamoms and true cardamoms; and (ii) phylogenetic relationship of these cardamoms based on variation of isozymic bands. Plant material (i.e. rhizome) of Java cardamoms was collected from Bogor Botanical Garden, and plant material of true cardamoms was gathered from Indonesian Medicinal and Aromatic Crops Research Institute, Bogor, Indonesia. Ten accessions were assayed in every population. The two isozymic systems was assayed, namely esterase (EST) and peroxidase (PER, PRX). Phylogenetic relationship was determined by UPGMA method. The results showed that esterase gave nine isozymic bands, i.e. Rf 0.15, 0.26, 0.29, 0.33, 0.38, 0.42, 0.45, 0.53, and Rf 0.58., while peroxidase gave 10 isozymic bands, i.e. Rf 0.06, 0.14, 0.18, 0.22, 0.26, 0.29, 0.32, 0.37, 0.41, and Rf 0.46. Relationship dendrogram indicated that the number of data will affect the grouping based on species similarity; more and more data was increasingly apparent groupings; within these groups there were variations among its members.
topic Amomum compactum
cardamoms
Elettaria cardamomum
isozyme
Zingiberaceae
url http://biosains.mipa.uns.ac.id/N/N0601/N060115.pdf
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