Scale-aware Auto-context-guided Fetal US Segmentation with Structured Random Forests
Accurate measurement of fetal biometrics in ultrasound at different trimesters is essential in assisting clinicians to conduct pregnancy diagnosis. However, the accuracy of manual segmentation for measurement is highly user-dependent. Here, we design a general framework for automatically segmenting...
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doaj-e1229156b12449df95313500a06abd212021-07-16T12:12:27ZengCompuscript LtdBIO Integration2712-00822020-12-011311812910.15212/bioi-2020-0016Scale-aware Auto-context-guided Fetal US Segmentation with Structured Random ForestsXin Yang0Haoming Li1Li Liu2Dong Ni3National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen 518060, ChinaNational-Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen 518060, ChinaDepartment of Electronic Engineering, the Chinese University of Hong Kong, Hong Kong, ChinaNational-Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen 518060, ChinaAccurate measurement of fetal biometrics in ultrasound at different trimesters is essential in assisting clinicians to conduct pregnancy diagnosis. However, the accuracy of manual segmentation for measurement is highly user-dependent. Here, we design a general framework for automatically segmenting fetal anatomical structures in two-dimensional (2D) ultrasound (US) images and thus make objective biometric measurements available. We first introduce structured random forests (SRFs) as the core discriminative predictor to recognize the region of fetal anatomical structures with a primary classification map. The patch-wise joint labeling presented by SRFs has inherent advantages in identifying an ambiguous/fuzzy boundary and reconstructing incomplete anatomical boundary in US. Then, to get a more accurate and smooth classification map, a scale-aware auto-context model is injected to enhance the contour details of the classification map from various visual levels. Final segmentation can be obtained from the converged classification map with thresholding. Our framework is validated on two important biometric measurements, which are fetal head circumference (HC) and abdominal circumference (AC). The final results illustrate that our proposed method outperforms state-of-the-art methods in terms of segmentation accuracy.https://www.ingentaconnect.com/content/cscript/bioi/2020/00000001/00000003/art00004automatic measurementcontour enhancementfetal biometricsstructured random forestsultrasound image segmentation |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Xin Yang Haoming Li Li Liu Dong Ni |
spellingShingle |
Xin Yang Haoming Li Li Liu Dong Ni Scale-aware Auto-context-guided Fetal US Segmentation with Structured Random Forests BIO Integration automatic measurement contour enhancement fetal biometrics structured random forests ultrasound image segmentation |
author_facet |
Xin Yang Haoming Li Li Liu Dong Ni |
author_sort |
Xin Yang |
title |
Scale-aware Auto-context-guided Fetal US Segmentation with Structured Random Forests |
title_short |
Scale-aware Auto-context-guided Fetal US Segmentation with Structured Random Forests |
title_full |
Scale-aware Auto-context-guided Fetal US Segmentation with Structured Random Forests |
title_fullStr |
Scale-aware Auto-context-guided Fetal US Segmentation with Structured Random Forests |
title_full_unstemmed |
Scale-aware Auto-context-guided Fetal US Segmentation with Structured Random Forests |
title_sort |
scale-aware auto-context-guided fetal us segmentation with structured random forests |
publisher |
Compuscript Ltd |
series |
BIO Integration |
issn |
2712-0082 |
publishDate |
2020-12-01 |
description |
Accurate measurement of fetal biometrics in ultrasound at different trimesters is essential in assisting clinicians to conduct pregnancy diagnosis. However, the accuracy of manual segmentation for measurement is highly user-dependent. Here, we design a general framework for automatically segmenting fetal anatomical structures in two-dimensional (2D) ultrasound (US) images and thus make objective biometric measurements available. We first introduce structured random forests (SRFs) as the core discriminative predictor to recognize the region of fetal anatomical structures with a primary classification map. The patch-wise joint labeling presented by SRFs has inherent advantages in identifying an ambiguous/fuzzy boundary and reconstructing incomplete anatomical boundary in US. Then, to get a more accurate and smooth classification map, a scale-aware auto-context model is injected to enhance the contour details of the classification map from various visual levels. Final segmentation can be obtained from the converged classification map with thresholding. Our framework is validated on two important biometric measurements, which are fetal head circumference (HC) and abdominal circumference (AC). The final results illustrate that our proposed method outperforms state-of-the-art methods in terms of segmentation accuracy. |
topic |
automatic measurement contour enhancement fetal biometrics structured random forests ultrasound image segmentation |
url |
https://www.ingentaconnect.com/content/cscript/bioi/2020/00000001/00000003/art00004 |
work_keys_str_mv |
AT xinyang scaleawareautocontextguidedfetalussegmentationwithstructuredrandomforests AT haomingli scaleawareautocontextguidedfetalussegmentationwithstructuredrandomforests AT liliu scaleawareautocontextguidedfetalussegmentationwithstructuredrandomforests AT dongni scaleawareautocontextguidedfetalussegmentationwithstructuredrandomforests |
_version_ |
1721297696753451008 |